| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0065 |
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| Symbol | |
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| ID | 5537524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 80524 |
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| End bp | 81621 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640892231 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001430221 |
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| Protein GI | 156740092 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00184975 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0058603 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAACAGC GCAACACAAG TCTCCCTCTC ATAGCCCTGA CCCTGCTGAC GGGAATCGCG
CTTGGCTGGT TTCTCAACGA CCTGATTCGT CGTCCCGCAG CGCCGTTGGC GCTCGCACCG
GCTTCACCGC CTGCCGTTGC CGCGCCGACT GCCAGCATCT CGGTTGCGCC AACTACTGCT
GTGTCGATTG AGCCAACCAC TGCTGTGTCG GTCGCGCCGC CGGCGCTGCC ATCCGTGGCG
ACTCCTGCGC CCGCCGTGAT GCCCTCGCCG CTTACATCCG AGCCATTGCC CACAGCCACG
CCCCCGCTAC GTATCGTCGG CTATGCCGGG CATCGAGTCG CTGCGGGTGA GACGCTGGAG
ACCATCGCGG ACCGCTATGG GAGCACGGTG GCGCTTATTG AAACATACAA TCGACTTGAC
GCGCCACCGC GTATTGGAAG GGAACTGGTT GTGCCGTTGC TGGCGCCAAC CGACGCAGGT
GATGCGCTGC TGGTGCGGCG CGGCGGCGCA GAGCGTCCCT GGATCGCGTT GACCCTCGAC
GCTGGCGCAG GCGCGGCGCC GACGCCACGC ATCCTGGCAG CGCTGCGTGA GCGCGGCATC
ACCATCACCT TCTTCCTCAC CGGACGCTGG ATGCGCGCCA ATCCCGACCT GGTGCGCCAG
ATGGTGGCGG ATGGACACGA ACTTGCCAAT CACACGGTGA ATCATCCCGA TCTGACGACG
CTCGACGACA ATACCATCCG CCGTGAACTG AACGAGACCG AGGCTATTTT GCATGAGATT
GCTCCAGGCG CGACGACACG CCCCTTCTTC CGCCCTCCCT ACGGCGCCTA CAATGAGCGG
GTGCTGCGCG CGGCACTGGC GGAAGGGTAC CTGCCCATCT ACTGGACACT CGACAGCCTG
GACTCGGTCG GCGAACCGAA GACGCCTGAG TTCCTCGTCG AGCGAGTCAC CGGGAAACTC
AGCCAGAACG ATCTGCGCGG CGCGATCATT CTGGCACACT GTGGCAGCGA AGCAACTGCT
GATGCGTTAC CGGAGATTCT GGATCGATTT GCGGTAATGG GCTTCGAGGT GCGGAAATTG
TCGGATGTGC TCAAGTGA
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| Protein sequence | MEQRNTSLPL IALTLLTGIA LGWFLNDLIR RPAAPLALAP ASPPAVAAPT ASISVAPTTA
VSIEPTTAVS VAPPALPSVA TPAPAVMPSP LTSEPLPTAT PPLRIVGYAG HRVAAGETLE
TIADRYGSTV ALIETYNRLD APPRIGRELV VPLLAPTDAG DALLVRRGGA ERPWIALTLD
AGAGAAPTPR ILAALRERGI TITFFLTGRW MRANPDLVRQ MVADGHELAN HTVNHPDLTT
LDDNTIRREL NETEAILHEI APGATTRPFF RPPYGAYNER VLRAALAEGY LPIYWTLDSL
DSVGEPKTPE FLVERVTGKL SQNDLRGAII LAHCGSEATA DALPEILDRF AVMGFEVRKL
SDVLK
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