| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0036 |
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| Symbol | |
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| ID | 5537494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 48275 |
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| End bp | 50185 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640892202 |
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| Product | VanW family protein |
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| Protein accession | YP_001430193 |
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| Protein GI | 156740064 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2720] Uncharacterized vancomycin resistance protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGAGA AGTACTACCA GGAATATGGT CCTATCCGGC GGCGCAAAGG CGAAGGACGT
CTGCTGATCG ATGAGCCTCC GCCCGAATTG CCGCCCGAAC CGCCGACGCC CAAACCACCG
CGTCGCACTC CGCCAGTGCG CCCCCGTCGC GCGCCGGTCA TTGGTGTTTT GCTCGTAATC
TTGGCGCTTG GCGTGGCGCT CTATTTCGCG CAACCTTTCA TCACCGACGT GATTGCCGCC
GATCGTGCTA TGCCCGGCGT CAGTATTCGT GGCGTTCCTG TCGGTGGCAT GTCGCGCGAG
GACATTCAGA ATCTGCTGAT GTCGCAGCAC GAAGCATTCT TGCAGACTCC ACTGACGCTG
GTGTTCGAGG GGCGTGAATG GCAACCATCA CTCGATGATC TCGGCGTTCA GTTCGATGGG
GAGCAGACTG CATCGCTTGC GCTCGGCATC GGGCGCACCG GCAGCCCATT GCATCGGATC
GAGGAACTCT GGGCGCTCCA GCAGGAGGGC GGCGTCGATA TTGCGCCGCG TCTTCGGGTG
GATGCCTCGC GGTTGCAACG CTATCTGACC AATCTCGCTG GCGAGATCGA ACAACCGCCG
CGTGATGCGG CGCTCAGTAT CGCTGCTGGC AAAGTGCTGC CCGCCTCTGC GCGCGCCGGA
CGCCAACTGC TGGTGGATGC CACAGCGCTC GACATCCTGC GCGCGTTGCA GTCGCTCGAG
CCGCGCACTG TGCCGTTGCG CACTCGCATC CTCGAACCAA CGCTGGCGGA TGACGATATT
GCCGCAGCCG TTGCAGATGC TGAACTGCTG CTGAGTCGAC CGCTCGAACT CCGGCAGGGC
GAACGGCGCT GGACGTGGGA TCAGGAACGC ATCGCCGAGA TGTTGACCAT CAGTATCATC
GATGGTCGCA TGTTTGTTGA TCTCGACCAG GCACGCCTGG AGCGCGCCGT TGCCCGGCTG
GCGCAGTTTG TCGACTCGCC GAGCGCAGAA CCGCGCGTTG CGTTCCGCAA TGGGCGCTTG
CACATTGTCG AGCCGGGGCG CGACGGGCTG CGCCTCGAAC AACCAGAAGC CGCCGAAGCG
ATCCGCCGTG CCCTGCGCAC GCAGGAGCAC ATCGTCGAAC TGCCGGTCGA AGTCGTTCGC
CCACAGATCA CGGCGGAAAC ACTGCCATCT CTGGGTATTG TCGAGTTGGT GGCGGAAGGC
AAATCGAGTT TTGCCGGTTC GGCTGAGTAC CGTATTACCA ACATCAAAGC CGGTGCTGAC
CGCATGAATG GTGTGCTCAT CCCCCCCGGC GCCGAGTTTT CCTTCAACAC CCAGCTTGGC
GCAGTTGACG CCGAACACGG TTTTGTCCAG GGATATGCGG TGATCGGCAA TCGCACCCAG
CTCGAGTGGG GCGGTGGCGT CTGCCAGGTT TCGACCACTG TGTTCCGCGC GGCGTTCTGG
GCAGGTCTGC CGATTACCGA ACGGCACGCG CATCCGTTCT ATATTTCCTG GTATGATGCG
TTCAGTTTTC CCGATCAGGC GGCGCCTGGC ATGGACGCCA CGATTTACAC CGGTGTGCAG
GACCTCAAGT TCGTCAATGA CACCGGTCAC TGGCTGCTGA TGGAAACAAT CGCCGATACG
AATGCGCAGG TTTTGAGTGT CCGGCTCTAT GGGACACGGC CAGACCGGCG TGTGGCGGTG
GTTGGACCGG AGATCGCCAA TATCGTGGCG CCGCCAGCGC AGGCGGTCTA TGTGAACGAT
CCGAGTCTGC CGGTCGGAAC CGTTCGCCAG ACCGACCGGG CGCGACGTGG GATGGATATC
AAGGTATACC GGGTGATCAC TGAGGGGGGG GTGCAGCGGA CGCCGGAATT GTTCTTTACT
CGCTTTAAAG CGTGGCCCGA TGTGTTTGTG CGTGGAACCA GAAGCCCATA A
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| Protein sequence | MSEKYYQEYG PIRRRKGEGR LLIDEPPPEL PPEPPTPKPP RRTPPVRPRR APVIGVLLVI
LALGVALYFA QPFITDVIAA DRAMPGVSIR GVPVGGMSRE DIQNLLMSQH EAFLQTPLTL
VFEGREWQPS LDDLGVQFDG EQTASLALGI GRTGSPLHRI EELWALQQEG GVDIAPRLRV
DASRLQRYLT NLAGEIEQPP RDAALSIAAG KVLPASARAG RQLLVDATAL DILRALQSLE
PRTVPLRTRI LEPTLADDDI AAAVADAELL LSRPLELRQG ERRWTWDQER IAEMLTISII
DGRMFVDLDQ ARLERAVARL AQFVDSPSAE PRVAFRNGRL HIVEPGRDGL RLEQPEAAEA
IRRALRTQEH IVELPVEVVR PQITAETLPS LGIVELVAEG KSSFAGSAEY RITNIKAGAD
RMNGVLIPPG AEFSFNTQLG AVDAEHGFVQ GYAVIGNRTQ LEWGGGVCQV STTVFRAAFW
AGLPITERHA HPFYISWYDA FSFPDQAAPG MDATIYTGVQ DLKFVNDTGH WLLMETIADT
NAQVLSVRLY GTRPDRRVAV VGPEIANIVA PPAQAVYVND PSLPVGTVRQ TDRARRGMDI
KVYRVITEGG VQRTPELFFT RFKAWPDVFV RGTRSP
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