Gene Rcas_0027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0027 
Symbol 
ID5537484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp33607 
End bp34134 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content60% 
IMG OID640892192 
Productsingle-strand binding protein 
Protein accessionYP_001430184 
Protein GI156740055 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.664632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0441795 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGAG ATCTGAACAA AGTGATGCTC ACCGGTCACC TAGGAGCGGA CCCGGAGATG 
CGCTTCACCC CGCAGGGCAG CGCAGTCACG ACGTTTCGCG TAGCGTCGAA CCGTTCGTGG
AAGTCGGGGG ATGGCATTCA GCACGATGAC ACGGAATGGT TCCGCATTGT GGCATGGGAT
AAACTCGCAG AAATCTGCAA CGAATATTTG AAGAAGGGCA CGCGCGTCTA TATCGAGGGG
CGGTTACAGA CGCGCAGTTG GGAAGATCGC AACACCGGCG AGAAGCGCTA CATGACCGAG
GTAGTGGCGC AGGATATGAT CATCCTGACG CCGAAAGGTG ATCGCATCCC CTCAGCCGAA
GCCGATGACC TCGAGGTGCA GGCGGTAGGC AGTGTTCCGC GTCGCGCTCC ATCGCCCATC
GCTCCCTCCG AGTCGATCGC CAATGGTCCC GCTCGTTCTG GCGCGCCTCG TGTTCCGGGT
CGCAATATGC CGCAGCCGGT CGAAAGCGAG GACGACCTGC CGTTCTAG
 
Protein sequence
MARDLNKVML TGHLGADPEM RFTPQGSAVT TFRVASNRSW KSGDGIQHDD TEWFRIVAWD 
KLAEICNEYL KKGTRVYIEG RLQTRSWEDR NTGEKRYMTE VVAQDMIILT PKGDRIPSAE
ADDLEVQAVG SVPRRAPSPI APSESIANGP ARSGAPRVPG RNMPQPVESE DDLPF