Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0027 |
Symbol | |
ID | 5537484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 33607 |
End bp | 34134 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640892192 |
Product | single-strand binding protein |
Protein accession | YP_001430184 |
Protein GI | 156740055 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0629] Single-stranded DNA-binding protein |
TIGRFAM ID | [TIGR00621] single stranded DNA-binding protein (ssb) |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.664632 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0441795 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAGAG ATCTGAACAA AGTGATGCTC ACCGGTCACC TAGGAGCGGA CCCGGAGATG CGCTTCACCC CGCAGGGCAG CGCAGTCACG ACGTTTCGCG TAGCGTCGAA CCGTTCGTGG AAGTCGGGGG ATGGCATTCA GCACGATGAC ACGGAATGGT TCCGCATTGT GGCATGGGAT AAACTCGCAG AAATCTGCAA CGAATATTTG AAGAAGGGCA CGCGCGTCTA TATCGAGGGG CGGTTACAGA CGCGCAGTTG GGAAGATCGC AACACCGGCG AGAAGCGCTA CATGACCGAG GTAGTGGCGC AGGATATGAT CATCCTGACG CCGAAAGGTG ATCGCATCCC CTCAGCCGAA GCCGATGACC TCGAGGTGCA GGCGGTAGGC AGTGTTCCGC GTCGCGCTCC ATCGCCCATC GCTCCCTCCG AGTCGATCGC CAATGGTCCC GCTCGTTCTG GCGCGCCTCG TGTTCCGGGT CGCAATATGC CGCAGCCGGT CGAAAGCGAG GACGACCTGC CGTTCTAG
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Protein sequence | MARDLNKVML TGHLGADPEM RFTPQGSAVT TFRVASNRSW KSGDGIQHDD TEWFRIVAWD KLAEICNEYL KKGTRVYIEG RLQTRSWEDR NTGEKRYMTE VVAQDMIILT PKGDRIPSAE ADDLEVQAVG SVPRRAPSPI APSESIANGP ARSGAPRVPG RNMPQPVESE DDLPF
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