| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp1632 |
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| Symbol | oprB |
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| ID | 1223944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 2050399 |
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| End bp | 2051769 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637241495 |
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| Product | putative porin B precursor outer (glucose porin) transmembrane protein |
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| Protein accession | NP_523191 |
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| Protein GI | 17549851 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3659] Carbohydrate-selective porin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCTCG AGAGCCGCTT CGGCATCGAA TCGAAGCCTG CGCGCCGGCA GGCCGCAGCC
GTCAAGCAAA CCGCCGGGCG CCTTGGCGCA TCGGCCATCG CCGCCGCCGC GCTGGCGCTC
TGCGCCGCCA GCGCCCACGC CTACGACGTC ACCACCAGCC CCTACCTGCT GGGCGACTGG
GGCGGCCTGC GCACCCGCCT GGCCGACCAG GGCGTGACCT TCAACCTCGG CTACGGCAGC
GAAGTCGCGC ACAACTTCAG CGGCGGCACC GACCACCTGA CGCGCTACAC CGATCAATGG
GTCATGGGCA CCACCCTCGA CCTCAACAAG CTGTGGGGCT GGAAGGGCGG CACGTTCCAG
GCCACCGTCA CCGACCGCAA CGGCCGCAAC CTGGGTTCGG ACGCCAACAT CGGCAACAAC
ATGCTGATCC AGGAAGTCTA CGGGCGCGGC CAGACCTGGC ACCTGACGCA GTTCTGGCTG
AACCAGAAGC TGCTGGACGA CCGCCTGGAG ATCAAGGCCG GCCGCGTGAC CGTGGGCGAA
GACTTCTTCT CGTTCTCGTG CGACTTCCAG AACCTGACCT TCTGCGGCTC GCAGCCGGGC
AACCTGGTCG GCAGCTACTG GGTCAACTGG CCGACCAGCC AGTGGGGCAC GCGCATCAAG
TACCACACCT CGCAAGAGAC CTACGCGCAG ATCGGCGTGT ACCAGGTCAA CCCGAACTAT
GTGAACGACA GCTGGGCAAG CCACAACGGC TGGAAGCTGA ACAACCCGAG CGGCACCACC
GGCGCGCTGA TCCCGCTGGA ATTCGGCTGG CTGCCGAACC TGGGCGGCCG CCCCGGCTCG
TACAAGGTCG GCGTCTGGTA CAACACGTCC GACGGCAAGG ACCTGTATGA GGACGTGAAC
GGCAACCCGC GCGGCATCAC CGGCCTGGAC GCGCGCACGC GCAACGGTCA ATATGGCGCC
TATCTCAACC TGCAGCAGCA GGTCACCGGC ACGGCCGGCG GACGCGGCGC CACGGTGTTC
CTGAACTTCT CGCAGGCCGA CCGCAACACC GCGCAGACCG ACCACCAGAT CTCGGTGGGC
GTGCAGTACA AGGGACCGTT CAACCGCCTC GCCGACACGG TCGGCTTTGC CGTGGGTGCA
ACGCACAACA ACGGCCGCTT CGCCGACTTC GTGCGCCAGA CCAACGCCCG CACCGGCCAG
AACACGATCG CGGGCGACGG CTACGAATAC GTGAGCGAGC TGTATTACAG CTGGTCGCCC
GTGCCGTCTG TGTACTTCCG TCCTAATCTG CAGTACATCA TGCATCCGGG CGGCACGAGC
CAGAACAAGA ATGCGTTCGT GGTCGGCCTG AAGTCCGGCA TCACGTTCTG A
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| Protein sequence | MELESRFGIE SKPARRQAAA VKQTAGRLGA SAIAAAALAL CAASAHAYDV TTSPYLLGDW
GGLRTRLADQ GVTFNLGYGS EVAHNFSGGT DHLTRYTDQW VMGTTLDLNK LWGWKGGTFQ
ATVTDRNGRN LGSDANIGNN MLIQEVYGRG QTWHLTQFWL NQKLLDDRLE IKAGRVTVGE
DFFSFSCDFQ NLTFCGSQPG NLVGSYWVNW PTSQWGTRIK YHTSQETYAQ IGVYQVNPNY
VNDSWASHNG WKLNNPSGTT GALIPLEFGW LPNLGGRPGS YKVGVWYNTS DGKDLYEDVN
GNPRGITGLD ARTRNGQYGA YLNLQQQVTG TAGGRGATVF LNFSQADRNT AQTDHQISVG
VQYKGPFNRL ADTVGFAVGA THNNGRFADF VRQTNARTGQ NTIAGDGYEY VSELYYSWSP
VPSVYFRPNL QYIMHPGGTS QNKNAFVVGL KSGITF
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