Gene RSp1372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSp1372 
SymbolnosY 
ID1223684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp1727359 
End bp1728183 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content67% 
IMG OID637241235 
ProductNosY transmembrane protein 
Protein accessionNP_522931 
Protein GI17549591 
COG category[R] General function prediction only 
COG ID[COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCG TCGAATGCAG GCAGGTCGCC ATCCTGGCGG CCAAGGAGCT GCGGGAGCGC 
CTGCGCAACC GGTGGGTGCT GACCGTGGCC GCCGTGTTTG CCGTGTTTTC GCTGGTGATC
TGCTATTTCG GCGGCGCCGA GCAGGGTGCG CTGGGGCCGC ACTCCATCGA GTTCGTCATC
ACCAGCCTGG TCAGCCTGGT CATCTACCTC ATTCCGCTGA TTGCCCTGCT GCTGGGATTC
GATGCCATCG TCGGCGAGCG CGAGCGCGGC ACGCTCGACT TGCTGCTGGC GCTGCCGATC
ACGCGGCTGG AGCTGCTGCT TGGCAAGTTT CTCGGGCTGG CCGCGGCGCT CACGCTGTCG
ACGCTGGCCG GCTTTGCATT GATGGTGGCG CTGCTCTGGC GGCAGTTCGG CCGGGTTGGG
CTGGTGCAGT CCGCCGGTTT CGTGCTCAGC TCGATTCTGC TGGGGCTGGT GTTCCTCAGC
CTGGCGCTGT GCGTCTCGGT GTTGAGCCGC GAGCGCACGC GCGCTTCGGG CTTGGCCATC
GCCCTGTGGT TCGGCTTCGT GCTGGTGTTC GATCTGCTGC TGCTCGGCTT GCTGGTCGCC
AGCGGCGGTG CCGTCGGCGG ACCCGCGCTG GCCTATCTGC TGCTGCTCAA TCCGACCGAC
ATTTTTCGCA TCCTCAATGT GTTCTCGCTG GACCAGTTGC GCGGCTTTCA GGGCCTGGTC
AGCATCGTGC CGCCGGCCTT GGGCAATCCC TGGGCGATGG GCGGGGCGAT GCTGGCCTGG
ATCGCCGCAC CGCTGGCGCT GGCCGCCTGG AGATTCCGCT CATGA
 
Protein sequence
MTGVECRQVA ILAAKELRER LRNRWVLTVA AVFAVFSLVI CYFGGAEQGA LGPHSIEFVI 
TSLVSLVIYL IPLIALLLGF DAIVGERERG TLDLLLALPI TRLELLLGKF LGLAAALTLS
TLAGFALMVA LLWRQFGRVG LVQSAGFVLS SILLGLVFLS LALCVSVLSR ERTRASGLAI
ALWFGFVLVF DLLLLGLLVA SGGAVGGPAL AYLLLLNPTD IFRILNVFSL DQLRGFQGLV
SIVPPALGNP WAMGGAMLAW IAAPLALAAW RFRS