Gene RSp1369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSp1369 
SymbolnosR 
ID1223681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp1722548 
End bp1725166 
Gene Length2619 bp 
Protein Length872 aa 
Translation table11 
GC content68% 
IMG OID637241232 
Producttransmembrane regulatory nosR transcription regulator protein 
Protein accessionNP_522928 
Protein GI17549588 
COG category[K] Transcription 
COG ID[COG3901] Regulator of nitric oxide reductase transcription 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATCCC GAAACCAAGG GATCGCGGCC TGGGTGGCCG CCTTCCTTCT GCTGCTGTTG 
GTGGGCGTGC CGCCGGCGCT GGCCGGCCGT GGCGCGTATG AAGCCGAGCT GCCGGCGAAC
CTGACCGAGG CCAGGGACCT GTGCGCGCTG GTGCCGTGCA CCGACGTGTT TCCCGGCGCG
GCGCGTTTTT CCGAACGCAT GGGGCAGCCG CCCTATGTCG AAGCCTACGG CCCGGCGCAA
GGCGGCAAGG CGCCGCTGCT GGGCTACGTG ATGCTGTCCA CCGACATCAC CGACATTCCC
GCCTATTCCG GCAAGCCCGT GGTGACGCTG ATCGGCATGG ACCGGCAAGG CCGCTATGTC
GGCGTCAAGG TCCTGAAGCA TTCCGAGCCG ATCCTGCTGC TGGGGATTCC GGAGTCCGCA
CTGCTGAACT TCAACAAGCA GTACATCGGC AAGTCGGTCA AAGACAAGAT CGAGGTCGGC
CAATCGCGCG CGGACGAGGG CGTGCTGGGT GTCGACGCCA TCTCCGGCGC CACCGTGACC
GTGATCGCCC AGAACCAGGT GCTGACCACC GCGGCGGCGG CCGTGGCGCG CCAGGTGGGC
ATTCTGTCGC CCACCCGGCA CGCGCCGACG CGCTATGCGC AGACCGGGCA GCGCGCGAGC
TGGGCAGACC TGGTCAAGCT GGGCAGCGTG CAGCGCCTGC TGATCCGGCC CGAGCAACTC
GGCCTGGAAC GCGCGCCGGA ACCCTTCATC GAACTCTGGT TCGGCGATCT CAACCACCCG
GACCTGGGCG CGAGCCTGCT TGGCCAGTCC GCCTGGAACG ATCTGCATGC GCGACTCAAC
CCGGACGAGC ACGCCATCTT CGTGATCCGC ACGGCAGGCG CGGCGTCGTT CAAGGGGTCC
GGCTTCGTGC GCGGCGGCAT CTACGATCGC ATCCAGATCA AGCAGGACGC GGCGTCCTTC
ACCTTCCGCG ATTCGGACTA CCTGAACCTC TATGGCCTGG CGGCCGACGG CGCGCCGGCC
TATACCGAAT CGGCCATCTT CGTGGTGCGC TCGCCGGGGT TCTCGGCGGC GTATCCGTGG
AAGCTGTCGT TCCTCGGCAA CCGCGTCGAT CGCGCGACCG GCACGCGCAG CTTCGTGACG
TTCGATGCGT CGTACTGGCT GCCCGATGCG TTGCTGCAGG GCGGGCGCCC ACACGTCGAC
GCGCCGGAGG CACCGTGGCG GCGGGTCTGG CGCACGCGCG CACCGCAGAT CGCCCTGTTC
GTCGCCCTGC TGGTGGCGGT GGGCGTGGTG TATGCGCTGC GTGAACGCCT GACGCGCCGC
GCCACCCACA AGAACAAGTG GCCGGTCAAC GCCTTCAAGT ACAGCGCCTG GGCCCTGAGC
ATCGGCTTCG TCGGCTTCGG GGCGATGGCC CAGCCGTCGA TCACGCAGGT GCTGACGTGG
TTCCATTCGC TGCTGTTCCA GTGGACGTGG TCGCTGTTCC TGACCGATCC GTTCATCTTC
TGCTTCTGGA TCTTCATCAT CCTGACGGTG TTCCTCTTCG GGCGCGGGCT GTTCTGCGGC
TGGCTGTGCC CGTTCGGCTC GCTGTCGGAA GCGATCCACA AGATCGGCGG CCGGATCGGC
TTCAAGCGCT GGCAGCGCCA GTTGCCGCGC GCCTGGCACG ATCGGCTGAA GTGGCTGAAG
TACGCCCTCT TCTTCGGCCT GCTGACGGTC TCGGTGTTCT CGATGGGGCT GGCCGAGAAG
CTCGCCGAGG TGGAGCCGTT CAAGACCACG TTCCTGGTCG GCATCCGCCA TCGGGCGTGG
CCGTACGGGT TGTTCGTCTG CGCGCTGCTG GGGATATCGC TGTTTGTCGA GCGGCCGTAC
TGCAAGTACC TCTGCCCCCT CGGGGCGGCG CTGGCCATGC CGAGCACGTT CCGCTGGTTC
GGCCTGCGCC GCAAGCAGGA CTGCAACAGC TGCAAGGCGT GCGCCGTGGG CTGCGGCTCG
CAGGCGATCG ACGCGGATGG CCGCATCGAC CATCGCGAAT GCCTGCACTG CCTGGACTGC
ATGGTGCTGT ACACCGACGT CAAGGGCTGC CCGCCGCTGG CCAGGGAGCG CAAGCGGCGC
GAGCGCGACG GCCTGGAGAT CACGCCCATC GGCAAGGATG GCTACTTCAT CCCGATCCAG
CCGGTGCCGA TGCCCCCGCG CGTGGCACAG GGGCCGGACC CGCGCATGCC GACCGAGCGC
GAGGTGCCGC CTGGACAGGA GGGGTCACGC GGCCTGCGCC GGCTGATGCT GGAGCTGCGC
GACCACCTCT GGCCCTGGAG CCGCGAGGGC TGGGCCTCGG CGCGTGCCCT GCAGATCGCG
GGCATTTCGC TGGCGCTGGC GGCAAGCCTG GTGTGGGTGC TGGCGGCCAT GGGGCGGTTG
TCGTCCGGTG CCGTCATCGG GTGGTGGTTC GGCTGGAGCG CCCATGAAGT GCTGATCCGG
CTGGCGGGTC GGCGCTATGT CAAGGACGGC CCGTGGTGGC GGGCGAACTA CCGGCGCGCA
ACCGTGATGG ACATGCTCAG CTACGTGGGC TTCAAGAACC TGCTGGTCGG CGCTGCACTG
TTCCTGACCC TGAAGGCGCT GGGGTGGCTG CCGGTATGA
 
Protein sequence
MPSRNQGIAA WVAAFLLLLL VGVPPALAGR GAYEAELPAN LTEARDLCAL VPCTDVFPGA 
ARFSERMGQP PYVEAYGPAQ GGKAPLLGYV MLSTDITDIP AYSGKPVVTL IGMDRQGRYV
GVKVLKHSEP ILLLGIPESA LLNFNKQYIG KSVKDKIEVG QSRADEGVLG VDAISGATVT
VIAQNQVLTT AAAAVARQVG ILSPTRHAPT RYAQTGQRAS WADLVKLGSV QRLLIRPEQL
GLERAPEPFI ELWFGDLNHP DLGASLLGQS AWNDLHARLN PDEHAIFVIR TAGAASFKGS
GFVRGGIYDR IQIKQDAASF TFRDSDYLNL YGLAADGAPA YTESAIFVVR SPGFSAAYPW
KLSFLGNRVD RATGTRSFVT FDASYWLPDA LLQGGRPHVD APEAPWRRVW RTRAPQIALF
VALLVAVGVV YALRERLTRR ATHKNKWPVN AFKYSAWALS IGFVGFGAMA QPSITQVLTW
FHSLLFQWTW SLFLTDPFIF CFWIFIILTV FLFGRGLFCG WLCPFGSLSE AIHKIGGRIG
FKRWQRQLPR AWHDRLKWLK YALFFGLLTV SVFSMGLAEK LAEVEPFKTT FLVGIRHRAW
PYGLFVCALL GISLFVERPY CKYLCPLGAA LAMPSTFRWF GLRRKQDCNS CKACAVGCGS
QAIDADGRID HRECLHCLDC MVLYTDVKGC PPLARERKRR ERDGLEITPI GKDGYFIPIQ
PVPMPPRVAQ GPDPRMPTER EVPPGQEGSR GLRRLMLELR DHLWPWSREG WASARALQIA
GISLALAASL VWVLAAMGRL SSGAVIGWWF GWSAHEVLIR LAGRRYVKDG PWWRANYRRA
TVMDMLSYVG FKNLLVGAAL FLTLKALGWL PV