Gene RSp1327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSp1327 
SymbolilvE3 
ID1223639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp1676987 
End bp1678051 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content58% 
IMG OID637241190 
Productbranched-chain amino acid aminotransferase 
Protein accessionNP_522886 
Protein GI17549546 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01123] branched-chain amino acid aminotransferase, group II 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATTCT CGAACACGTC GACTACTCGG CCGACCCCCA TAGAACAACG CAAGGAAGCG 
CTACGTGTCC CCAAGCTTGG AAAGGTGTTC ACTGATCACA TGGTGACCAT CCAGTGGACG
AGCGAAGACG GGTGGCACGA TGCCAGGATT CGTCCTCGCG AACCCTTCTC CCTCGACCCT
GCTTCCGCAG TCCTGCATTA CGCTCAGGAA ATTTTCGAGG GCATGAAAGC CTATGCGCAA
CCGGACGGTG GTGTGGTTTT GTTCCGCCCC GTGGACAACG CGCGCCGGTT CAACGCGTCG
GCAACCCGAA TGACGATGCC GACTATTCCG GAAACTGTCT TCGTTGAGGC AATCGAGCAA
CTGCTTCGCG TAGACGGCGC GTGGGTTCCG AGTGGCGAAG GAACGAGCTT GTACCTGCGC
CCCTTCATGT TTGCCAGTGA GTCCTTCCTG GGCGTGCGCC CAGCTACCCA GTTCACATTT
TGCGTGATCG CCAGCCCTGC AGGCGCCTAC TTCAAGGGCG GCGCCGAGCC GATCACTGTT
TGGATCTCGG AACATTACTC TCGCGCGGCG AAAGGCGGCA CGGGCGCAGC CAAATGCGGC
GGGAACTACG CCGGGGGATT GATAGCCCAG GCAGAGGCGA CACGTAATGG CTGCGATCAG
GTCGCGTTTC TCGACGCAGC CGAAAGCCGG TGGATCGAGG AACTCGGCGG AATGAACGTC
TTCTTTGTCG TAGACGGCGT GTTGGTTACA CCTCCGCTCG GCACGATTTT GCCAGGTATC
ACACGAGAAT CCATCATCAG CATCGCGGAA AAGAAGGGCA TCAAGGTCGA GGAGCGTCCT
TACTCCTTCG ATCAATGGCG AGAAGATGCT GCAACTGGCC GACTGACCGA AGCATTCGCC
TGTGGGACAG CTGCGGTGAT CGCGTCGATC GGCAAGGTCC GTTTCAAGGA CGGTGAATTC
TCGATTTCAG GGGGGCAACT GACAGATGCA CTGCGAGACG AGTTGGTAGG TATTCAGCGC
GGCGTCATCG CGGACGATTT CAACTGGACT TGGCGCGTGA AATGA
 
Protein sequence
MQFSNTSTTR PTPIEQRKEA LRVPKLGKVF TDHMVTIQWT SEDGWHDARI RPREPFSLDP 
ASAVLHYAQE IFEGMKAYAQ PDGGVVLFRP VDNARRFNAS ATRMTMPTIP ETVFVEAIEQ
LLRVDGAWVP SGEGTSLYLR PFMFASESFL GVRPATQFTF CVIASPAGAY FKGGAEPITV
WISEHYSRAA KGGTGAAKCG GNYAGGLIAQ AEATRNGCDQ VAFLDAAESR WIEELGGMNV
FFVVDGVLVT PPLGTILPGI TRESIISIAE KKGIKVEERP YSFDQWREDA ATGRLTEAFA
CGTAAVIASI GKVRFKDGEF SISGGQLTDA LRDELVGIQR GVIADDFNWT WRVK