Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSp1327 |
Symbol | ilvE3 |
ID | 1223639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 1676987 |
End bp | 1678051 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637241190 |
Product | branched-chain amino acid aminotransferase |
Protein accession | NP_522886 |
Protein GI | 17549546 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
TIGRFAM ID | [TIGR01123] branched-chain amino acid aminotransferase, group II |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATTCT CGAACACGTC GACTACTCGG CCGACCCCCA TAGAACAACG CAAGGAAGCG CTACGTGTCC CCAAGCTTGG AAAGGTGTTC ACTGATCACA TGGTGACCAT CCAGTGGACG AGCGAAGACG GGTGGCACGA TGCCAGGATT CGTCCTCGCG AACCCTTCTC CCTCGACCCT GCTTCCGCAG TCCTGCATTA CGCTCAGGAA ATTTTCGAGG GCATGAAAGC CTATGCGCAA CCGGACGGTG GTGTGGTTTT GTTCCGCCCC GTGGACAACG CGCGCCGGTT CAACGCGTCG GCAACCCGAA TGACGATGCC GACTATTCCG GAAACTGTCT TCGTTGAGGC AATCGAGCAA CTGCTTCGCG TAGACGGCGC GTGGGTTCCG AGTGGCGAAG GAACGAGCTT GTACCTGCGC CCCTTCATGT TTGCCAGTGA GTCCTTCCTG GGCGTGCGCC CAGCTACCCA GTTCACATTT TGCGTGATCG CCAGCCCTGC AGGCGCCTAC TTCAAGGGCG GCGCCGAGCC GATCACTGTT TGGATCTCGG AACATTACTC TCGCGCGGCG AAAGGCGGCA CGGGCGCAGC CAAATGCGGC GGGAACTACG CCGGGGGATT GATAGCCCAG GCAGAGGCGA CACGTAATGG CTGCGATCAG GTCGCGTTTC TCGACGCAGC CGAAAGCCGG TGGATCGAGG AACTCGGCGG AATGAACGTC TTCTTTGTCG TAGACGGCGT GTTGGTTACA CCTCCGCTCG GCACGATTTT GCCAGGTATC ACACGAGAAT CCATCATCAG CATCGCGGAA AAGAAGGGCA TCAAGGTCGA GGAGCGTCCT TACTCCTTCG ATCAATGGCG AGAAGATGCT GCAACTGGCC GACTGACCGA AGCATTCGCC TGTGGGACAG CTGCGGTGAT CGCGTCGATC GGCAAGGTCC GTTTCAAGGA CGGTGAATTC TCGATTTCAG GGGGGCAACT GACAGATGCA CTGCGAGACG AGTTGGTAGG TATTCAGCGC GGCGTCATCG CGGACGATTT CAACTGGACT TGGCGCGTGA AATGA
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Protein sequence | MQFSNTSTTR PTPIEQRKEA LRVPKLGKVF TDHMVTIQWT SEDGWHDARI RPREPFSLDP ASAVLHYAQE IFEGMKAYAQ PDGGVVLFRP VDNARRFNAS ATRMTMPTIP ETVFVEAIEQ LLRVDGAWVP SGEGTSLYLR PFMFASESFL GVRPATQFTF CVIASPAGAY FKGGAEPITV WISEHYSRAA KGGTGAAKCG GNYAGGLIAQ AEATRNGCDQ VAFLDAAESR WIEELGGMNV FFVVDGVLVT PPLGTILPGI TRESIISIAE KKGIKVEERP YSFDQWREDA ATGRLTEAFA CGTAAVIASI GKVRFKDGEF SISGGQLTDA LRDELVGIQR GVIADDFNWT WRVK
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