| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp1285 |
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| Symbol | scrA |
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| ID | 1223597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1633423 |
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| End bp | 1634820 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637241148 |
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| Product | PTS system, sucrose-specific (IIBC component) transmembrane protein |
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| Protein accession | NP_522844 |
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| Protein GI | 17549504 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific |
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| TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component
[TIGR01996] PTS system, sucrose-specific IIBC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.410172 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.484299 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGAAC AGGAGACAGC ACAGGCCCTG CTGCCGTTGC TGGGCGGGCC GGACAACGTG
GTGTCCCTGG CGCACTGCGC GACCCGGCTG CGGCTGGTGG TGCGCGACGC GGCCAAGGTC
GATCACGGCG CGATCACGGC GCTGGCGCTG GTGAAGGGCG CGTTCAGCAA TGCCGGGCAG
GTGCAGATCG TCATCGGCCA GGGCACGGTC AACCGGGTCC ACGACGCGCT CCAGCCCCTG
CTCAACAGCA CGGCGGCCGC GTCGCTCGAA GACGTCAAGC GCGAAGCCAC CACTCGGCTC
AATCCGGTCC AGCGGCTGGC GCGCACCCTG TCCGACATCT TCGTGCCGAT CATCCCCGTC
ATCGTGGCCT CCGGCCTGCT GATGGGCGTG CTCGGGATGC TGCGCAGCAT GGGCTGGGCC
GAGGGCAGCA ACGCGCTGTT CCAGATCTTC GACATCTTTG CCAGCACGGC CTTCGTGTTC
CTGCCGATCC TGATCGCGTT CTCGGCGGGC AAGAGCTTCG GCGTGTCGCC GTTCCTGGCG
GCGGCGCTGG CGGGCATCCT GATCCATCCC GCATTGCAGA ACGCCTGGAC GCTCGGCAGC
GGCGTGCGCG AATACTGGGA CCTGTTCGGC GTGCCGGTGG CCAAGGTCGG CTACCAGGGC
ACCGTGCTGC CGGTCCTGTT CGCGGTGTGG ATCATGGCGC GCATCGAGCG GCTCGTGCGC
CGCGTCGTGC CGACCGGGGT CGACCTGATT TTCACGCCGT TCCTGACGCT GCTGATCTCC
GGCGCGATTG CGCTGACGGT GGTCGGCCCG ATCGGCCGCG CGCTCGGCGA CGCGCTGTCG
TTCGGCCTGC AATGGGTGTA CCAGCACGGC GGGCCACTGG CCGGTCTGGT GTTCGGCGGT
CTGTATTCGG CGATCGTCGT CACCGGCGTG CATCACAGCT TTCATGCGAT CGAGGCGGGG
CTGCTCGCCA ATCCGTCGAT CGGCGTCAAT TTCCTGCTGC CGATCTGGTC GATGGCCAAC
ATTGCCCAGG GTGGCGCGGC GCTGGCGGTG TTCAGCGTCT CGCGCGACGA CAAGATCCGC
CAGATCGCGC TGCCCGCGGC GCTGTCGTGC CTGATGGGCA TCACCGAGGC CGCGATCTTC
GGCATCAACC TGCGCTTCTT CCGGCCGTTC ATTGCTGCGG CGGTGGGCGG TGCCGTCGCC
GGCGGCTGGG TGGTGGCCAC GCATGTGGGC ATGACCGGCA TCGCCCTGAC CGGATTCCCG
GGGCTGGCCA TCGTGCAGCC GGGCAGCCTG GTGAATTACC TGATCGGCGC GGGCATCGCG
TTCTCCGTCG CGTTCGTCTG TGCCCGGCTT GCCTGCCTGA AGGTGACCGT TCCGTTCGGG
GAGAAGTCCG GTGCTTGA
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| Protein sequence | MNEQETAQAL LPLLGGPDNV VSLAHCATRL RLVVRDAAKV DHGAITALAL VKGAFSNAGQ
VQIVIGQGTV NRVHDALQPL LNSTAAASLE DVKREATTRL NPVQRLARTL SDIFVPIIPV
IVASGLLMGV LGMLRSMGWA EGSNALFQIF DIFASTAFVF LPILIAFSAG KSFGVSPFLA
AALAGILIHP ALQNAWTLGS GVREYWDLFG VPVAKVGYQG TVLPVLFAVW IMARIERLVR
RVVPTGVDLI FTPFLTLLIS GAIALTVVGP IGRALGDALS FGLQWVYQHG GPLAGLVFGG
LYSAIVVTGV HHSFHAIEAG LLANPSIGVN FLLPIWSMAN IAQGGAALAV FSVSRDDKIR
QIALPAALSC LMGITEAAIF GINLRFFRPF IAAAVGGAVA GGWVVATHVG MTGIALTGFP
GLAIVQPGSL VNYLIGAGIA FSVAFVCARL ACLKVTVPFG EKSGA
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