Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSp1179 |
Symbol | TIS1021 |
ID | 1223491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 1486564 |
End bp | 1487550 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637241044 |
Product | TIS1021 transposase |
Protein accession | NP_522740 |
Protein GI | 17549400 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3039] Transposase and inactivated derivatives, IS5 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAGC AAACCAGCTT TTCGGAAGCG GAGTACGCGG GCAAGAAACG CGTGACCAAG CGTGAGCGTT TCCTGGCGGA GATGGAGAAG GTCGTTCCAT GGACGCGGCT GGTTGCGGCA GTCGAGCCGC ACTACCCCAA AGGAGAACGA GGACGGCCGC CAATCGGGCT GCAGAGGATG CTGCGCATTT ATTTCTTGCA GCAGTGGTAC GGGCTGTCGG ACGAAGGACT GGAAGATGCG TTGTACGACA GCATGGCGAT GCGTGCGTTC GCCGGCATTG ATCTGGCGGT CGAGAACGTG CCGGACGCGA CCACGCTGCT GAAGTTCCGG CGCCTGCTGG TCGAGCATGA CCTGACTGGC AAGCTGTTCG ACGAGATCGG CATCATGCTG TGCGAGCGGG GGCTGATGAT GAGGGAAGGC ACGATCGTGG ATGCCACCAT CATCGAAGCG CCGCCGTCGA CCAAGAATGC CGAGAAGAGC CGCGATCCGG AGATGCACCA GACCAAGAAG GGCAACGAAT GGCACTTTGG AATGAAGGCA CACATTGGGG TGGATGCGTC GTCGGGCCTG GTGCATAGCG TGGTTGGCAC GGCAGCGAAT GAGTCCGATG TCTCGCAGGC CCACGCGTTG CTGCATGGCC ATGAGGAAGA CGCGTTTGGC GATGCAGGTT ACACCGGCGT TGAGAAGCGC GACGAGATGC AAGGCAAGGG CACGAAGTGG CATGTTGCGC TCAAGCGCAG CAAGATCAAG GCGATGCGCG ATGGCGCCAT CAAGGACTTG CTAATCGCGG CGGAGAGGAC CAAGGCTCAG ATTCGGGCTC GGGTCGAACA TCCGTTCCAT GTCATCAAGA ATCTGTTTGG TCATCGCAAG GTTCGTTACA AGGGCTTGGC CAAGAACACG GCGCAACTGT TCAGCTTGTT CGGTCTCGCC AATCTGGTGC TCGCCAGGAG CCAGTTGCTG GCCAGCCCTG AAAGCATTCC GTCCTGA
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Protein sequence | MKKQTSFSEA EYAGKKRVTK RERFLAEMEK VVPWTRLVAA VEPHYPKGER GRPPIGLQRM LRIYFLQQWY GLSDEGLEDA LYDSMAMRAF AGIDLAVENV PDATTLLKFR RLLVEHDLTG KLFDEIGIML CERGLMMREG TIVDATIIEA PPSTKNAEKS RDPEMHQTKK GNEWHFGMKA HIGVDASSGL VHSVVGTAAN ESDVSQAHAL LHGHEEDAFG DAGYTGVEKR DEMQGKGTKW HVALKRSKIK AMRDGAIKDL LIAAERTKAQ IRARVEHPFH VIKNLFGHRK VRYKGLAKNT AQLFSLFGLA NLVLARSQLL ASPESIPS
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