Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSp1152 |
Symbol | tISRso5 |
ID | 1223464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 1451412 |
End bp | 1452503 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637241017 |
Product | ISRSO5-transposase protein |
Protein accession | NP_522713 |
Protein GI | 17549373 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3335] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAATGG GACGGCCGAA GGCGGAACTG GTGCTGAGCG AGGACGAGCA GACGCAACTG GCTGGGATGG TGCGTTCGCG CAGTATCCCG GCGGCGTTGG TGATGCGTGC GCGCCTTGTC TTGGCGGCGG CCGCAGGCGA GCCCAACAGT GAGATCGCCG AGCGCCTGCA GCTCACGCGC GCTACGGTGG GCAAATGGCG CGCCCGGTTC CTTGAGCGGC GCATCAATGG GTTGTACGAC GAACTGCGAC CCGGCAAGCC GCGTACCATC GACGACGAGC GCGTGGCCGA ACTCATCAAG ACGACGCTGC ATACGAAGCC TGCGGATGGC TCGACTCACT GGAGTGTGCG CGCGGTGGCG GCCGAGACAT CGATCTCGCC TACCAGCGTG CACCGCTATT TCAAGCTGTT GGGGCTGCAA CCGCATCGCA GCGAGACCTT CAAGCTGTCC ACCGATGCGT TTTTCATCGA GAAGCTGCGC GACGTGGTGG GGCTGTATCT GAACCCGCCC GAGAATGCAT TGGTGCTGTG CGTGGACGAG AAGAGCCAGT GCCAGGCACT GGAGCGCACT CAGCCGATGC TGCCCATGGG GCTGGGCTAT GTCGAAGGCG TCACCCACGA CTATGTCCGC CATGGCACAA CGACGCTGTT TGCCGCGCTG AACGTACTCA ACGGCGCGGT ACTGGCCGAG TGTAAGCCGC GCCATCGGCA CCAAGAGTTC CTCGCCTTCT TGCGCTCGAT CGACAAAGCC GTGCCCGCCG ACCTCGATGT GCATTGCATC GTGGATAACT ACAGCAGCCA TAAGCATCCC AAGGTCAAGG CGTGGCTGGC GGCCCGTCCG CGCTGGCATA TGCACTTCAT CCCGACCTAC AGCTCTTGGC TCAATCAGGT CGAACGCTTC TTCGCGATCA TTACCGACAA GGCCATTCGC CGTGGCTCGT TCACGTCGGT TAAGGAACTG GTTCAGAAGA TCGATCACTT CGTCGCTCAC TACAACCAGA ACTGCAAACC ATTCGCTTGG ACCGCGACCG CTGATTCAAT CCTCTCCAAG CTCAGCAGAC TTTGCGAACG AATTAGCGGA ACGGGACACT AG
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Protein sequence | MPMGRPKAEL VLSEDEQTQL AGMVRSRSIP AALVMRARLV LAAAAGEPNS EIAERLQLTR ATVGKWRARF LERRINGLYD ELRPGKPRTI DDERVAELIK TTLHTKPADG STHWSVRAVA AETSISPTSV HRYFKLLGLQ PHRSETFKLS TDAFFIEKLR DVVGLYLNPP ENALVLCVDE KSQCQALERT QPMLPMGLGY VEGVTHDYVR HGTTTLFAAL NVLNGAVLAE CKPRHRHQEF LAFLRSIDKA VPADLDVHCI VDNYSSHKHP KVKAWLAARP RWHMHFIPTY SSWLNQVERF FAIITDKAIR RGSFTSVKEL VQKIDHFVAH YNQNCKPFAW TATADSILSK LSRLCERISG TGH
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