| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp1105 |
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| Symbol | otsA |
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| ID | 1223417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 1399713 |
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| End bp | 1401110 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637240970 |
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| Product | alpha,alpha-trehalose-phosphate synthase |
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| Protein accession | NP_522666 |
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| Protein GI | 17549326 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0380] Trehalose-6-phosphate synthase |
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| TIGRFAM ID | [TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.680742 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.435396 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGGC TGATCGTGGT CTCCAACCGC GTGGCGCCCA TCGCCGAGGG CCAGGCGAGC
GCCGGCGGGC TGGCGGTCGG CGTGTACGAC GCGCTGCGCG ATACCGGCGG CGTGTGGTTC
GGCTGGAGCG GCGAGATCGC GCCGGGCGCG TCGGGCGAGC CGTCCATCGC CGCCAAGGGC
GCCATCACCT TCGCCACCGT GGGCCTGAGC CGCCGCGACT ACGACCAGTA CTACCGCGGC
TTCGCCAATG CCACGCTGTG GCCGGTGTTC CACTACCGCG TCGATCTGGC GCGCTACGAG
CGCCAGGAGT ACCACGGCTA CCGGCGCGTC AACACGCAGT TCGCGCATCA GCTCAAGGCG
CTGGTGCAGC CCGACGACAT CCTGTGGGTG CACGACTATC ACCTGATCCC GTTCGCAGCC
GAATGCCGGG CGCTGGGGCT GCGCAACCGC ATCGGTTTCT TCCTGCACAT TCCGTTTCCG
TCGCCGGAGA TCCTGACGAC GATCCCGCCG CACGAAGAGC TGATGCGCGC GCTGTGCGCC
TACGACCTGC TCGGCTTCCA GACCGAGACC GATCGCGTCG CCTTCTACGA CTACATCGAA
CGCGAGGCGC GCGGCTACAT CGAGAACAAG GAGCACAACG GGCCGGTGCA CGCCTACGGC
AACACGCTGC GCGCCGAGGT CTACCCGATC GGCGTGCATC CGGACGAGAT CGCGCGGCAG
GCGGTGTCGT CGCTGGCGCG GCGCAATCCG TTCGCGCGCG AGGCCGATGC GAGCGGCGGC
CGCCCGCTCA AGCTCATCAT GAGCGTGGAC CGGCTGGACT ATTCCAAGGG CCTGCCCGAA
CGCTTCCGCG CGTTCGAGCA GTTGCTGGAC GATTTTCCCG ACCACCGGCG GCACGTGACC
TTCGTTCAGA TCGCGCCGAC CTCGCGGCAG GATGTGCAGA GCTACCAGCA GATCCGCCAG
CGGCTGGAGG CCGAATCGGG CCGCATCAAC GGCAAGCATT CGGAACTGGA CTGGACACCG
ATCCGCTACA TCAACAAGCA GTACGACCGG CGCATGCTGA TGGCGCTGTT CCGCGCCTCG
CACATCGGCT ATGTCACGCC GCTGCGCGAC GGCATGAACC TGGTGGCCAA GGAATACGTG
GCGGCGCAGG ACCCGGAGGC GCCGGGCGTG CTGGTGCTGT CGCGCTTCGC GGGCGCGGCG
CGCGAGCTCG ATGCCGCGCT GATCGTCAAT CCGTATGACA CGCGCGGCAT GGCCGAGGCG
CTCAACCGCG CGCTGACGAT GCCGCTCGAA GAGCGCAAGG CGCGCCACGC CCACATGATG
GACCGGCTGC GCGCGGCCGA CCTCACGGCA TGGCGCGAAC GCTTTCTGGC CGATCTGCGC
GGCGCATCGG CCCGCTAG
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| Protein sequence | MSRLIVVSNR VAPIAEGQAS AGGLAVGVYD ALRDTGGVWF GWSGEIAPGA SGEPSIAAKG
AITFATVGLS RRDYDQYYRG FANATLWPVF HYRVDLARYE RQEYHGYRRV NTQFAHQLKA
LVQPDDILWV HDYHLIPFAA ECRALGLRNR IGFFLHIPFP SPEILTTIPP HEELMRALCA
YDLLGFQTET DRVAFYDYIE REARGYIENK EHNGPVHAYG NTLRAEVYPI GVHPDEIARQ
AVSSLARRNP FAREADASGG RPLKLIMSVD RLDYSKGLPE RFRAFEQLLD DFPDHRRHVT
FVQIAPTSRQ DVQSYQQIRQ RLEAESGRIN GKHSELDWTP IRYINKQYDR RMLMALFRAS
HIGYVTPLRD GMNLVAKEYV AAQDPEAPGV LVLSRFAGAA RELDAALIVN PYDTRGMAEA
LNRALTMPLE ERKARHAHMM DRLRAADLTA WRERFLADLR GASAR
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