| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp1101 |
|---|
| Symbol | galE |
|---|
| ID | 1223413 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003296 |
|---|
| Strand | - |
|---|
| Start bp | 1395984 |
|---|
| End bp | 1397009 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637240966 |
|---|
| Product | UDP-glucose 4-epimerase protein |
|---|
| Protein accession | NP_522662 |
|---|
| Protein GI | 17549322 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1087] UDP-glucose 4-epimerase |
|---|
| TIGRFAM ID | [TIGR01179] UDP-glucose-4-epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.139946 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0944899 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAAA CCATCCTGCT GACCGGCGCC ACCGGCTATA TCGCCTCGCA CACCTGGGTT
GAACTGCTGG ACGCCGGCTA CCAGGTGATC GGCCTGGACA ATCTGTGCAA CAGCAGCGCC
GCCGTGCTGG CCCGCATCGA GCAGATCACC GCCAAGACGC CGAAGTTCGT GCAGGGCGAT
GTCCGCGACC GCCGGCTGCT CGATGACCTG TTCGCCAGCA CGCGCATCTC GGCCGTCATC
CACTTCGCCG CGCTGAAGTC GGTGGGGGAA TCGGTCCAGA AGCCGCTGGC CTATTACGAC
AACAACATGG GCGGGCTGGT CACGCTGTGC GCGGCCATGG CGCATGCCAA CGTGCGGCAG
CTGGTGTTCA GCTCGTCGGC CACGGTGTAC GGCAATCCGC ATACCGTGCC CATCACCGAG
TCGTTCCCGC TGTCGGCCAC CAACCCCTAC GGCCAGACCA AACTGATGGG CGAGCAGGTG
CTGCGCGACC TGGAAGTCTC CAACGGCGCC TGGCGGATCG CCTACCTGCG CTATTTCAAC
CCGGTGGGCG CGCACCACAG CGGCCTGATC GGCGAAGACC CGCGCGGCAT CCCCAACAAC
CTGATGCCCT ACGTCGCCCA GGTGGCGGCG GGCCGGCGCG AGCAGCTGTC CGTCTTCGGC
GGCGACTGGC CGACGCCGGA CGGCACCGGT GTGCGCGACT ACATCCACGT GGTGGACCTG
GCGCGCGGCC ACCTGAGCGC CCTGGACGTG CTGCGCCGCG ACGGACGCGG CTTTACCGTC
AACCTCGGCA CCGGCCGCGG CTATTCGGTG CTGGAAGTCG TTGCGGCTTA CCAACGCGCC
AGCGGCCGTC CGATCCCCTA CGAGATCGTC GCGCGCCGCC CCGGCGACAT CGCCGCCTGC
TACGCCGATC CGTCTCTGGC CGCATCGCAG CTGGGCTGGC GGGCCCAGTA CGGCATCGAA
CGCATGTGCG AGGACTCGTG GCGCTGGCAA AGCATGAATC CGGACGGCTT TCAGACCCGG
GGCTGA
|
|---|
| Protein sequence | MNETILLTGA TGYIASHTWV ELLDAGYQVI GLDNLCNSSA AVLARIEQIT AKTPKFVQGD
VRDRRLLDDL FASTRISAVI HFAALKSVGE SVQKPLAYYD NNMGGLVTLC AAMAHANVRQ
LVFSSSATVY GNPHTVPITE SFPLSATNPY GQTKLMGEQV LRDLEVSNGA WRIAYLRYFN
PVGAHHSGLI GEDPRGIPNN LMPYVAQVAA GRREQLSVFG GDWPTPDGTG VRDYIHVVDL
ARGHLSALDV LRRDGRGFTV NLGTGRGYSV LEVVAAYQRA SGRPIPYEIV ARRPGDIAAC
YADPSLAASQ LGWRAQYGIE RMCEDSWRWQ SMNPDGFQTR G
|
|---|
| |