| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp1086 |
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| Symbol | cpaE2 |
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| ID | 1223398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1377813 |
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| End bp | 1379132 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637240951 |
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| Product | pilus assembly protein |
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| Protein accession | NP_522647 |
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| Protein GI | 17549307 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4963] Flp pilus assembly protein, ATPase CpaE |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.807258 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTACT TTCTCCTGCA TGGCGGCGGC AATGCCGACA GGCAATCGGG CGGCGTGCAC
CGCTGGCTGG CCGGCGCCAT CCGCGAGCTG GGCATGCTGG TGGCCGAGAC CAGCGGGCAC
GATGCCTTCC TCGAGCAGAT CGGCGCGGTG CACCCGGAGG TGGTGTTCGT GCGCTTTGCG
TCGTCGCCCG CCCGGATCGA CGTACCCGAG CATGACCAGA AGCTGGGCGA AGGCACGGAT
GCCATCGGCG AGGCGACGCA GCTGGTTGCC CAGTTGACGC GGCTGTTCCC GGGCCTGCCG
CTGGTGGCGG TCGGCTCGGC GTCGGACGGC CGGGCGATGC TGGCGGCGCT GCGGGCGGGC
GTGAAGGATT TCATCGACGT CGATGGCGCG CCTGCCGAGG CGGTGCGCGT GGTGCGCAGG
CTGCTGGCCG AGCGCGCCTC CGCCGAGCCG ACGCGCCGGG GCCGCGTGCT GGCCATCCTG
GGGGCCCGGC CCGGCGTGGG CACCACCACG CTGGCGTCCA ACCTGGCGAC GCTGGTGCGG
CGCACCTCCG GCGGCGACGT GATGCTGCTC GACCTTGGCC AGCCGTTGCG CGACGGTGCG
CTGTACCTGA ACGTTCCGGC CAATTTCCAT TTCGTGGAGG CGGTGCGCAA CCTGCGCCGC
TTCGATCAGG TGTTCGTGCA GACCGCGCTG TCGCGCCACC CGAACGGGCT GGCCGTGCTG
CCGCTGCCGG TCTCGCTGGC GGAGATGCGC GACATCTCGT TCTCCGAGGC GCTGGGGCTG
CTCAACCGCC TGCGCACCTT CTTCGATTTG CAGGTGGTCG ACCTGGGCGG CTTCAACAAC
ATCGACTTCA TCGCGCAGCT GGTCAAGGCG GCCGACGACG TGATGCTGGT GACGGAGCAG
AGCGTGGGCG CCATCGTCTC CGCCGCCGAG CTGATGCAGG AGTTGAAGAA GCGCGAGATC
GATCGCGAGC GCCTGCACCT GATTCTCTCC AAGTTCGATG CGCGCCTGTC GCTCGATGCC
GAGCAGATCG GGGTGCGGCT GGAGATTCCC TCGGTGCTGA CGGTGCCGAG CCGACGCCGG
GCGCTGGTCG TGGCCTCCAA CCAGGGCGCG ATGCTGGCGG AGACCCACCC GATCGATCCC
TACGTCCGGG CGATCGCCGG CATCGTGCAG ACGCTGGGCT ACACCCAGCC CGGCGAGCGC
GCGCCCGGCG TGGCGGGCTG GATGGCGGGC ATGCGCGCGC GGCTGGGCGA GCGCTTCAGG
CGCAAACCGA CGGAGCCGGC TGAACTGGAT CTGCGCACCA CGGAGCGGAA CGCGACATGA
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| Protein sequence | MDYFLLHGGG NADRQSGGVH RWLAGAIREL GMLVAETSGH DAFLEQIGAV HPEVVFVRFA
SSPARIDVPE HDQKLGEGTD AIGEATQLVA QLTRLFPGLP LVAVGSASDG RAMLAALRAG
VKDFIDVDGA PAEAVRVVRR LLAERASAEP TRRGRVLAIL GARPGVGTTT LASNLATLVR
RTSGGDVMLL DLGQPLRDGA LYLNVPANFH FVEAVRNLRR FDQVFVQTAL SRHPNGLAVL
PLPVSLAEMR DISFSEALGL LNRLRTFFDL QVVDLGGFNN IDFIAQLVKA ADDVMLVTEQ
SVGAIVSAAE LMQELKKREI DRERLHLILS KFDARLSLDA EQIGVRLEIP SVLTVPSRRR
ALVVASNQGA MLAETHPIDP YVRAIAGIVQ TLGYTQPGER APGVAGWMAG MRARLGERFR
RKPTEPAELD LRTTERNAT
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