| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp1020 |
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| Symbol | epsA |
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| ID | 1223332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1286203 |
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| End bp | 1287348 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637240885 |
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| Product | EPS I polysaccharide export outer membrane transmembrane protein |
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| Protein accession | NP_522581 |
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| Protein GI | 17549241 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.784638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.873856 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGTAA GCATTCCGAA TATCCGAAAA GCAGTCGTGT CGTTGAGCGT GGTGCCGTTG
CTGGCCGCAT GCGCATTTGC CCCGGGCATG CGGTTCGATC CGCAGCGCCC GCTGGATCCG
GCCGACAACG CGTCGGTACC GAAGATCACG CCCATTACGC CCGATCTTGT GCGGGCCGGG
CAGACGCAGG CACAGGTGCA GGCGTCGCAC GAGAATGCCG ATGTCGGGCC GTTGCTGGCA
AAGGCAACGC CGTATCGCAT CGGCACGGGC GACATCCTGT CGATCGTGGT CTGGGATCAC
CCCGAACTGG TGTTCCCGAC GCAGACCTAT TCGATCGGGT CCACATACGA TCTTGCCAGC
TTTGGCGGGG CACCCAGCGT GTCCGGCTAT GTGGTCAGCA CCGGTGGCGA CATCCAGTTC
CCCTATGCCG GCGTCATCAA GGTCGCAGGC AAGACCCAGA ACGAAGTCCG CGACGAGATC
TCGCGTGGCA TTGCCCGGGT GGTGAAGGAC CCGCAGGTCA CGGTGCGGGT GCTGGCCTAC
CGCAGCCAGC GGGTCTACGT GGATGGTGAG GTCAAGACCC CCGGCCAGCA GAGCATCGAC
GACGTGCCGA TGACCCTGGT CGAGGCGCTG AACCGCGCCG GCGGCATCAA CACCACCACC
GGGGACAACA GCCGGATCCG GCTGACCCGC GGCGGCAAGC AATGGACGCT GAGCATGCCC
GCGCTGATGC AGCAGGGCAT CGACCCGGCC AACATTCTGC TGCGCGGCGG CGACATCGTC
CGCGTGGAGC AGCGCGAGGA CAGCAAGGTC TTCGTGACCG GCGAAGTGGT CAGACCGTCG
ACCGTGCTGC CGCGCAACGG CAGGCTGACG CTGAGCGAAG CGCTGGGCGA GGCCGGGGGC
GTCAGCCCGG TGTCGTCCGA TCCGCGCAAT GTCTACGTGA TCCGCCGGGC CGCGGAGGGC
GAGCCCCAGG TCTACCACCT GGATGCCAAG TCGCCCGTGG CGCTGGCGCT GGCCGAAGGC
TTCGAGCTGA AACCGAAGGA CGTGGTGTAC GTGGATGCCG GCAGCCTGGT GCGCTGGAGC
CGTGTGATCA ACCTCTTGGT GCCGACCGCA ACCCCGCTGA TCGGGGCGGC CGCTGTCGCG
AAATGA
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| Protein sequence | MFVSIPNIRK AVVSLSVVPL LAACAFAPGM RFDPQRPLDP ADNASVPKIT PITPDLVRAG
QTQAQVQASH ENADVGPLLA KATPYRIGTG DILSIVVWDH PELVFPTQTY SIGSTYDLAS
FGGAPSVSGY VVSTGGDIQF PYAGVIKVAG KTQNEVRDEI SRGIARVVKD PQVTVRVLAY
RSQRVYVDGE VKTPGQQSID DVPMTLVEAL NRAGGINTTT GDNSRIRLTR GGKQWTLSMP
ALMQQGIDPA NILLRGGDIV RVEQREDSKV FVTGEVVRPS TVLPRNGRLT LSEALGEAGG
VSPVSSDPRN VYVIRRAAEG EPQVYHLDAK SPVALALAEG FELKPKDVVY VDAGSLVRWS
RVINLLVPTA TPLIGAAAVA K
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