Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSp1018 |
Symbol | epsB |
ID | 1223330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 1283475 |
End bp | 1285730 |
Gene Length | 2256 bp |
Protein Length | 751 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637240883 |
Product | EPS I polysaccharide export transmembrane protein |
Protein accession | NP_522579 |
Protein GI | 17549239 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
TIGRFAM ID | [TIGR01005] exopolysaccharide transport protein family [TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.646097 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.76334 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCAGA ACCTCTCTCA GCCGCCAGCC GTCAACGCAC CGGAAAGCGA GCTCGACCTC GTTCGCTACC TGGACGTTCT GGTGGCCAAT CGCTGGCTGA TCGCGGGCAT TGCCGCGGTT GTCATGCTGC TCGGCGCGAC CTATGCCTTC CTGGCGCGCC CGGTCTACGA GGCCGATGTC CTGGTGCAGG TGGAAGACAA TCCCAACAGC GCCAAGAGCC TGCTGGGCGA TGTGTCGAGC CTGTTCGATG TGAAGACCGA CGCCAACGCC GAGATCGAGA TCCTGCGATC GCGCATGGTG GTGGGCAAGG CGGTCGACAA TCTGCATCTC TACATCACGG CCAAGCCGCA CTACTTTCCG CTGATCGGCG CGTGGGTTGC CAGCCGGGCG AAGCAACTGT CCGAGCCCGG GCTGTTCGGC CTGGGCGGCT ATACCTGGGG CACGGAGCTG ATCGACGTGG ACGGCTTCGA TGTGCCGGAG GCGCTCGAAG GCCAGCCGTT CAAGCTGACC GCGCTGGGCA ACGGGCGCTA CCGGCTGGAA AACAAGAGCC TGGATACGCC CATCGAGGGC GTGGTCGGCG AGCCGCTCGA GGCGAAGCAG AGCGTCGGGA CGATCCAGCT GCTGGTCAAT ACGCTGGCCG CCAAGGCCGG CGCCGCCTTC GAGCTGCAGC GCGACTCGCG GCTCAAGACG CTGGAGATGC TGCAGGACAA GCTCAAGATC TCCGAGAAGG GCAAGCAAAG CGGCATCATC GGCGCTTCGC TGGAAGGCAA GAATCCCGCG CTGACCGCCG CGATCATGAA CCAGATCGCC ACCGAGTACG TGGCCCAGAA CATCAAGCGC AAGGCCGAAG AGGCGGAACG CTCGCTGGTC TTCCTGGATG GCCTGCTGCC GCAGCTCAAG CTGCAGCTCG AGCGCGCGGA AATGAAGTAC AACGAGATGC GCAATCTGCG CGGGACCTTC GACCTGAGCG AAGAGGGCAA GGCGTTCCTG CAGGAGAGCG TGACCACCGA GACCAGCCTG CAGGAGCTCA AGCAGAAGCG CGCCGAGCTG CTGACCCGCT TTACCGCGAG CCATCCGGGC GTGCAAGCCA TCGATCAGCA GATCGCGGTG ATGAGCGGGA AGGTCGGGGC CATGACGCGC CGGCTCAAGT CGCTGCCCAA CATCGAGCAG GACACCGTGC GGCTGATGCG CGACGTCCAG GTCGACAACG ATCTTTACGT GAGCTTGCTC AACGACATGC AGCAGCTCAA GCTGGTCAAG GCCGGCAAGG TGGGCAACGT GCGCCTGGTC GACGGCGCCG CGGTGCCGGA AGAGCCGGTG AAGCCCAAGA AGCTGACGGT GACGGCGCTG GCCGGCGTGC TGGGGGTGGT GCTGGGCGTG GTGGCGGCGT TCGTGCGCAA TACGCTGTTC GGCGGCATCA CCGAGCCGCA GGACATCGAG GAGCACACCG GGTTGAGCGT CTACGCCACC GTGCCGCTGT CGGATGTGCA GATCGACCTG AGCAGCCAGC TGACGACGCA CAAGCGCGGC CAGTACCTGC TGGCCAGACG GGTGCCTGAC GACCCGTCGA TCGAAAGCCT GCGCAGTCTG CGCACCGCGC TGCAGTTCGC GATGCAGGAC TCGGGCAACA ACCTGGTGGT GCTGACCGGG CCGACCCCGG GGGTGGGCAA GTCCTTCGTG TCCGCCAACC TGGCCGCGGT CATCGCGACC GGCGGCAAGC GGGTCCTGCT GGTGGACGCC GACATGCGCA AGGGCTACCT GCACCAGTAT TTCGGCAAGG ACCGCAAGCC CGGCCTGCTG GATCTGCTGG CGGGCGACCG CTCGATCGAG CAGGTGGTGC ATCGCGAGGT CGTCCCCGGG CTGGACTTCA TCGCGACGGG CCTGTTCCCG CACAACCCGT CCGAGCTGCT GCTCAATCCG CGCATGGTCG AGCTGATGGA TACCTTCCGC GCGCAGTACG ACCTGGTGCT GATCGACACG CCGCCGGTGC TGGCCGTGAC CGATACCGCC ATCCTGGCCG CGCGCGCCGG AACGGTGCTG ATGGTCACCC GCTTCGAGCG CAGCACGCTG GGCGAGATCC GCGAGACGAT CAAGCAGCTC CAGCACGCCA ATGTCGAGGT CCGGGGCGTG GTGTTCAACG CGCTCGACCC CAATACCTAT CGCTATGGAT ACGGCTCGCG TTACGGGCGC TACCGCTACG TGCAGTACGG GTACACGAGC AAGCCATCGG CGGAGGCCGA GGCCGAATCC GCGTAG
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Protein sequence | MTQNLSQPPA VNAPESELDL VRYLDVLVAN RWLIAGIAAV VMLLGATYAF LARPVYEADV LVQVEDNPNS AKSLLGDVSS LFDVKTDANA EIEILRSRMV VGKAVDNLHL YITAKPHYFP LIGAWVASRA KQLSEPGLFG LGGYTWGTEL IDVDGFDVPE ALEGQPFKLT ALGNGRYRLE NKSLDTPIEG VVGEPLEAKQ SVGTIQLLVN TLAAKAGAAF ELQRDSRLKT LEMLQDKLKI SEKGKQSGII GASLEGKNPA LTAAIMNQIA TEYVAQNIKR KAEEAERSLV FLDGLLPQLK LQLERAEMKY NEMRNLRGTF DLSEEGKAFL QESVTTETSL QELKQKRAEL LTRFTASHPG VQAIDQQIAV MSGKVGAMTR RLKSLPNIEQ DTVRLMRDVQ VDNDLYVSLL NDMQQLKLVK AGKVGNVRLV DGAAVPEEPV KPKKLTVTAL AGVLGVVLGV VAAFVRNTLF GGITEPQDIE EHTGLSVYAT VPLSDVQIDL SSQLTTHKRG QYLLARRVPD DPSIESLRSL RTALQFAMQD SGNNLVVLTG PTPGVGKSFV SANLAAVIAT GGKRVLLVDA DMRKGYLHQY FGKDRKPGLL DLLAGDRSIE QVVHREVVPG LDFIATGLFP HNPSELLLNP RMVELMDTFR AQYDLVLIDT PPVLAVTDTA ILAARAGTVL MVTRFERSTL GEIRETIKQL QHANVEVRGV VFNALDPNTY RYGYGSRYGR YRYVQYGYTS KPSAEAEAES A
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