| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp0691 |
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| Symbol | hmgA |
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| ID | 1222998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 878028 |
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| End bp | 879374 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637240551 |
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| Product | homogentisate 1,2-dioxygenase |
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| Protein accession | NP_522252 |
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| Protein GI | 17548912 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3508] Homogentisate 1,2-dioxygenase |
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| TIGRFAM ID | [TIGR01015] homogentisate 1,2-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.398963 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATGC TTGCTCCCGC GGCCAAGAAC GCCTTCACCC CCGCGTCGCC GGACCGGCCC
GCCTACCAGA GCGGCTTCGG CAACGAGTTC GCCACCGAGG CGCTGCCGGG CGCACTGCCG
CACGGCCAGA ATTCGCCACA GCAGGCGCCG TATGGCCTGT ATGCCGAGCA ACTGTCCGGC
ACGGCGTTCA CCGCGCCGCG CGCGCACAAT CGCCGCGCGT GGCTGTACCG CATCCGCCCG
GCCGCCGTGC ATCTGCCATT CGAGCCCATC GCGCAAGACC GCTTCCACAG CGACTTCCAC
GCCGTGCCTG CGTCGCCCAA CCAGCTGCGC TGGGACCCGC TGCCCGCGCC GGCCGCCGGC
ACGGACTTCA TCGACGGCAT CGTCACCTTT GCCGGCAACG GCGGGCCGGA TGCGCAGACC
GGCTGCGGCA TCCATCTCTA TGCCGCCAAC GCGTCGATGA CCGGCCGCTT CTTCTACAAC
GCCGACGGCG AACTGCTGAT CGTGCCGCAG CAAGGCCGCC TGCGCCTGCT GACCGAGCTG
GGCGTGCTCG ACGTCGAACC GCTGGAAATC GCCGTGATCC CGCGCGGCGT GCGCTTTCGC
GTGGAACTGC CGGACGGCGA GGCGCGCGGC TACCTCTGCG AGAACTTCGG CGCGATCTTC
CGACTGCCCG ACCTGGGCGT GATCGGCTCG AACGGCCTGG CCAACCCGCG CGACTTCCTC
ACGCCGCACG CCTGGTACGA AGACCGCGAG GGCGATTTCG AGCTCGTCGC CAAGTTCCAC
GGCAACCTGT GGCGCGCGCG GATCGGGCAC TCGCCGCTGG ACGTGGTGGC CTGGCACGGC
AACTACGCGC CGTACAAGTA CGACCTGCGC CTGTTCAACA CCATCGGCTC GATCAGCTAC
GACCACCCGG ACCCGTCGAT CTTCCTGGTG CTGCAGAGCG TGTCCGACAC GCCGGGCGTG
GACGCCATCG ATTTCGTCAT CTTCCCGCCA CGCTGGCTGG CGATGGAGCA CTCGTTCCGC
CCGCCCTGGT TCCACCGCAA CATCGCCAGC GAGTTCATGG GCCTGATCCA GGGCGTGTAC
GACGCCAAGG CCGAGGGCTT CGTGCCGGGC GGCGCGAGCC TGCACAACTG CATGACGGGC
CACGGCCCCG ATGCCGAGAC CTTCGAGAAA GCCAGTCATG CCGACACGAC CCAGCCGCAC
AAGGTGGAGG CGACGATGGC CTTCATGTTC GAGACCCGCG GCGTGATCCG CCCGACACGT
TTCGCGGCCG AATCGGCGCA GCTGCAGGCC AGGTACTTCG AGTGCTGGCA GGGCCTGAAG
AAGCATTTCG ACCCGGCCAA GCGCTGA
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| Protein sequence | MNMLAPAAKN AFTPASPDRP AYQSGFGNEF ATEALPGALP HGQNSPQQAP YGLYAEQLSG
TAFTAPRAHN RRAWLYRIRP AAVHLPFEPI AQDRFHSDFH AVPASPNQLR WDPLPAPAAG
TDFIDGIVTF AGNGGPDAQT GCGIHLYAAN ASMTGRFFYN ADGELLIVPQ QGRLRLLTEL
GVLDVEPLEI AVIPRGVRFR VELPDGEARG YLCENFGAIF RLPDLGVIGS NGLANPRDFL
TPHAWYEDRE GDFELVAKFH GNLWRARIGH SPLDVVAWHG NYAPYKYDLR LFNTIGSISY
DHPDPSIFLV LQSVSDTPGV DAIDFVIFPP RWLAMEHSFR PPWFHRNIAS EFMGLIQGVY
DAKAEGFVPG GASLHNCMTG HGPDAETFEK ASHADTTQPH KVEATMAFMF ETRGVIRPTR
FAAESAQLQA RYFECWQGLK KHFDPAKR
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