Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSp0649 |
Symbol | mmsB |
ID | 1222956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 825302 |
End bp | 826198 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637240509 |
Product | 3-hydroxyisobutyrate dehydrogenase oxidoreductase protein |
Protein accession | NP_522210 |
Protein GI | 17548870 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
TIGRFAM ID | [TIGR01692] 3-hydroxyisobutyrate dehydrogenase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.340196 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.109273 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGATCG CTTTTATCGG GCTCGGCAAC ATGGGCGCCC CGATGGCGCG CAACCTGCTG AAGGCGGGCC ACGCGCTCAG CGTGTTCGAC CTCGATGCGC GGGCCGTGCA GTCGCTGGTG GACGCGGGCG CCAGCGCCGC CCCCTCGCCC AAGGCCGCGG CGACCGGCGC CGACTGCGCG ATCACCATGC TGCCGGCCGC CGCGCACGTG CACAGCGTGC TGACGGCGGA CGACGGCATC CTGGCGGGCA TCGCCAAAGG CGTGCCGATC ATCGATTCGA GCACGATCGA CCCGGACAGC GCCAAGGCCC TCGCCGCGCT GGCCACCGCG CACGGCAACC CGTTCGTCGA CGCGCCGGTC TCCGGCGGCA CCGGCGGCGC GGCGGCCGGC ACGCTGACCT TCATGGTGGG CGGCGGCGCG GCCGTGTTCG AGCAGGTGCG CCCGGTGCTG TCGGCCATGG GCAAGAACCT CGTGCACTGC GGCGAGGCGG GCGCCGGCCA GGGCGCGAAG ATCTGCAACA ACCTGGTGCT CGGCATCACC ATGGCCGGCG TGGCCGAGGC CATGTCGCTG GGCGAGGCGC TGGGCATCGA CCCCAAGGTG CTGGGCGGCA TCATCAACAC CTCCACCGGC CGCTGCTGGA GTTCGGACAC GTACAACCCC TTCCCCGGCG TGATCGAGAC GGCGCCGTCG TCGCGCGGCT ACACCGGCGG GTTCGGCACC GACCTGATGC TCAAGGACCT CGGCCTGGCC GGCGATGCCG CCAAGTCGGT GCGCCAGCCC GTCTACCTGG GCGCGCTCGC GCAGCAGCTC TACCAGGCCA GCAGCAGCCA GGGCGCCGGC AAGCTCGATT TCTCGGCGGT GATCCGGCTG TACCGGCCGG CAGGAGCCGC ACGATGA
|
Protein sequence | MKIAFIGLGN MGAPMARNLL KAGHALSVFD LDARAVQSLV DAGASAAPSP KAAATGADCA ITMLPAAAHV HSVLTADDGI LAGIAKGVPI IDSSTIDPDS AKALAALATA HGNPFVDAPV SGGTGGAAAG TLTFMVGGGA AVFEQVRPVL SAMGKNLVHC GEAGAGQGAK ICNNLVLGIT MAGVAEAMSL GEALGIDPKV LGGIINTSTG RCWSSDTYNP FPGVIETAPS SRGYTGGFGT DLMLKDLGLA GDAAKSVRQP VYLGALAQQL YQASSSQGAG KLDFSAVIRL YRPAGAAR
|
| |