Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSp0534 |
Symbol | icc |
ID | 1222841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 668076 |
End bp | 668915 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637240394 |
Product | putative ICC protein |
Protein accession | NP_522095 |
Protein GI | 17548755 |
COG category | [R] General function prediction only |
COG ID | [COG1409] Predicted phosphohydrolases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTTTCA TACAATCCCT GCTGGTTTTG AATGAAGGCG ATGCCGCATT GGACAGAGCA ATGGTGGAAA TGACCGCAGC AAGAGGGAAC AAGACCGTCA CCGTCGTGCA GATCACAGAC CCGCACCTGT TTGCCGACCG TGACTCCGAG TTGATGGGCT ATCGCACGTA TCCGATGCTG TCGAAAACGA TCGACGCAAT CCGCGGGCAT GACTTCAGGC CGGATGCGTG CTTTCTGACA GGCGACATTT CGCAGGACGA GTCCGCCGAT TCCTACGAGC TGGCGCGGTT CGAGCTGGAA AGGCTGGGCA TTCCGGTGTT CTGGATTCCC GGGAATCACG ATGATCGCGG CAGGGCGGAA GCCGTGTTCG GACAATCGGA GCGCATCCAT CGCCTGAGCA AGCTCACGAC GGCGGACTGG GACTTCATCC ATCTGGAGAC CTGCCGGCGT GGGGCCGATG AGGGATACCT CAGCGATCCG GATTTTGAGC GCTTTGTCTC GGATGTGGAG GCCTCGGCCG GGGCGGGGAA ACAGATTGCG GTCGTCATGC ACCATCATCC GGTGCCGACG CAGACGCCCC TGCTGGATGG CTACATGCTG CAGGATGGCG AGCGCCTGCT GAGCTTCCTT GACGACCAGC GGCAGGTGAG GCTGGTGATC TGCGGCCATG TCCACGGCGA TTACCAGCTT CAATACGGCA GCCAGACGAT CGAAGTCTGC CCGGCCACCT GCTTCCAGTG GGAAAAGGGT ACCCGCACCG CGAAAGCCGA AGACTGGCGG GGGTTCAGGA TTTTTGAATT TTCATCGGCC GGTTACCAAT CGACATTGAT TTCCGTGTAA
|
Protein sequence | MRFIQSLLVL NEGDAALDRA MVEMTAARGN KTVTVVQITD PHLFADRDSE LMGYRTYPML SKTIDAIRGH DFRPDACFLT GDISQDESAD SYELARFELE RLGIPVFWIP GNHDDRGRAE AVFGQSERIH RLSKLTTADW DFIHLETCRR GADEGYLSDP DFERFVSDVE ASAGAGKQIA VVMHHHPVPT QTPLLDGYML QDGERLLSFL DDQRQVRLVI CGHVHGDYQL QYGSQTIEVC PATCFQWEKG TRTAKAEDWR GFRIFEFSSA GYQSTLISV
|
| |