Gene RSp0301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSp0301 
SymbolTIS1421a 
ID1222433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp395530 
End bp395916 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content63% 
IMG OID637240161 
ProductTIS1421-transposase protein A 
Protein accessionNP_521862 
Protein GI17548522 
COG category[L] Replication, recombination and repair 
COG ID[COG3039] Transposase and inactivated derivatives, IS5 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00123351 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGCCGTTGG CGCTGATGGT CACCGGTGCC AATCGTCACG ACTCGGTGGT GTTCGAGGTG 
CTCGTTGACG CCATCCCGAG CGTGCCCGGA CTCGATGGCC GCCCGCGATG CCGCCCCGAC
AAGCTTCACG CGGATAAGGG ATACGACTTC GCGCGATGCC GCCGGCATCT GCGCAAGCGG
GGCATGACTC CCCGGATCGC TCGCCGTGGC ATCGAGAAGA ACGACCGGCT CGGCAAGCAT
CGCTGGGTGG TCGAACGCAC CCATGCCTGG CTTGCTGGAT TCGGCAAGTT GCGCATTCGT
TTCGAGCGTT CTCTTCAGAC TCACCTCGCT TTGCTCACCC TGGCTTGCGC CGTCATCTGC
GGACGATTTG TTGATCGGTT TTGTTAG
 
Protein sequence
MPLALMVTGA NRHDSVVFEV LVDAIPSVPG LDGRPRCRPD KLHADKGYDF ARCRRHLRKR 
GMTPRIARRG IEKNDRLGKH RWVVERTHAW LAGFGKLRIR FERSLQTHLA LLTLACAVIC
GRFVDRFC