Gene RSp0227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSp0227 
Symbolfcs 
ID1222358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp282389 
End bp284263 
Gene Length1875 bp 
Protein Length624 aa 
Translation table11 
GC content72% 
IMG OID637240086 
Productferuloyl-CoA synthase 
Protein accessionNP_521788 
Protein GI17548448 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000611579 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0633289 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACATGG AGTCGATGAA ACAGGCGGCG GCCCGCTATC GTCCGGTGTC GATCGGCGCG 
GGCACGGTCG AGGTGTGCCG GGAAGCGGGC GGCGCCTGGC ATCTGCGCTC GGCTGAGCCG
ATCGGTGCCT ATCCCGAGCG GATGACGGAT TGCCTGGTGC GCGGGGCCGG ACAGCATCCG
GATCGCGTCC TCGCGGCGCA GCGCGGCGCC GATGGGCAGT GGGAGCGCAT CACCTATGCG
CAGATGCTGC ACCGGGCGCG CGCGGTCGGC CAGGCGCTGC TGGCGCGGGG GCTGTCGCCC
GAGCGGCCGT TGCTGATCCT GTCGGGCAAC GATCTGCAGC ATCTGCAGCT GGCGCTGGGC
GCCATGTATG CCGGCATTCC CTATTGCCCG GTGTCGCCGG CCTACGCGCT GGTGACGCAG
GACTACAGCC GGCTCGCCTA CCTGGTGCGG CACCTGACGC CGGGCCTGGT CTATGCCACC
GACGGTGCGC TGTTCGCCGG CGCGATCCAG GCGGTGGTGC CGCCGGAGAC CGAGGTCGCG
ATCGACCACG GCGAGGTGGC GGGGCGCGCC GTGACCCGGC TGGCGTCGCT GCTCGCGACC
GGGCCGGCCG ACGTGGATGC CGCCAACGCC CGCGTGGGCC CCGACACGAT CGCCAAGTTC
CTGCTGACCT CGGGCTCGAC GCGCAGCCCC AAGGCGGTCA CCACCACGCA TCGCATGCTG
TGCAGCAACC AGCAGATGCT GCTGCAGACC TTTCCCTGCT TCGGCGAGGC GCCGCCCGTG
CTGCTGGACT GGCTGCCGTG GAACCACACC TTCGGCGGCA GCCACAACGT GGGCATCGCG
CTGTACAACG GCGGCAGCTA CTACATCGAC AGCGGCAAGC CGACACCGCA GGCGTTCGAG
CAGACGCTGC GCAACCTGCG CGACGTGCAG CCGACGGTGT ACTTCAACGT GCCCAAGGGC
TGGGAGATGC TGACCGACGC GCTCGAGCGC GACCCCGCCC TGCGCGAGCA CTTCTATGCG
CGCGTCCGGC TGTTCTTCTT TGCCGGGGCC GGGCTGTCGC AGGCCGCGTG GGACCGGCTC
GAGGGCGTGA CCGAGGCCCA CTGCGGCGAG CGCATCCGCA TCATGGCCGG CCTGGGGATG
ACCGAGACCG CGCCGTCGTG CACGTTCACC ACCGGCCCGG TCATGATGGC CGGCTACATC
GGCCTGCCGG CGCCCGGCTG CGAGGTCAAG CTCGTGCGGG TCGACGGCAA GCTCGAAGCC
CGCTTCAAGG GCCCGCATGT CATGCCGGGC TACTGGCGCG CGCCGGAGCT GGCCGCTGAA
ACGTTCGACG AAGACGGCTA CTACCGCTCG GGCGACGCCG TGCGCTTCGT CGACGAGGCG
CGGCCCGAGA TCGGCCTGAT GTTCGACGGC CGCATCGCCG AGGACTTCAA GCTCAGCTCC
GGCACCTTCG TCAGCGTGGG GCCGCTGCGG GCCCGGATCA TCAGCGAGGG CGCGCCCTAC
GTGCTCGACG CGGTGATCGC CGGGATGAAC CGCGACGACC TCAGCGTGCT GGTGTTTCCG
CGCCTGGAGC ACTGCGCGGC GCTCGCGGGC CTGGGCGCCG GCGCCAGCCC CGCGCAGATC
GCCGACAGCC CTGCGGTGCG GGCGTGCTTC GCGGTGCTGC TCGAGCGCCT GAACCGCGCG
GCCACCGGCT CGGCCAACCG GATCGCCCGC CTGCGCCTGC TGGAAGAGGC GCCGTCGCTC
GACCACGGCG AGGTCACCGA CAAGGGCTCG ATCAACCAGC GCGCCGTGCT CGCCCGCCGG
GCGGCGCTGA TCGAGGCGAT CTACGCGGGC GGCGACGGCA AGGTGATGCT GGCGGAGCCG
GCCGCTGAGT GTTGA
 
Protein sequence
MHMESMKQAA ARYRPVSIGA GTVEVCREAG GAWHLRSAEP IGAYPERMTD CLVRGAGQHP 
DRVLAAQRGA DGQWERITYA QMLHRARAVG QALLARGLSP ERPLLILSGN DLQHLQLALG
AMYAGIPYCP VSPAYALVTQ DYSRLAYLVR HLTPGLVYAT DGALFAGAIQ AVVPPETEVA
IDHGEVAGRA VTRLASLLAT GPADVDAANA RVGPDTIAKF LLTSGSTRSP KAVTTTHRML
CSNQQMLLQT FPCFGEAPPV LLDWLPWNHT FGGSHNVGIA LYNGGSYYID SGKPTPQAFE
QTLRNLRDVQ PTVYFNVPKG WEMLTDALER DPALREHFYA RVRLFFFAGA GLSQAAWDRL
EGVTEAHCGE RIRIMAGLGM TETAPSCTFT TGPVMMAGYI GLPAPGCEVK LVRVDGKLEA
RFKGPHVMPG YWRAPELAAE TFDEDGYYRS GDAVRFVDEA RPEIGLMFDG RIAEDFKLSS
GTFVSVGPLR ARIISEGAPY VLDAVIAGMN RDDLSVLVFP RLEHCAALAG LGAGASPAQI
ADSPAVRACF AVLLERLNRA ATGSANRIAR LRLLEEAPSL DHGEVTDKGS INQRAVLARR
AALIEAIYAG GDGKVMLAEP AAEC