Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSp0227 |
Symbol | fcs |
ID | 1222358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 282389 |
End bp | 284263 |
Gene Length | 1875 bp |
Protein Length | 624 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637240086 |
Product | feruloyl-CoA synthase |
Protein accession | NP_521788 |
Protein GI | 17548448 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000611579 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0633289 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACATGG AGTCGATGAA ACAGGCGGCG GCCCGCTATC GTCCGGTGTC GATCGGCGCG GGCACGGTCG AGGTGTGCCG GGAAGCGGGC GGCGCCTGGC ATCTGCGCTC GGCTGAGCCG ATCGGTGCCT ATCCCGAGCG GATGACGGAT TGCCTGGTGC GCGGGGCCGG ACAGCATCCG GATCGCGTCC TCGCGGCGCA GCGCGGCGCC GATGGGCAGT GGGAGCGCAT CACCTATGCG CAGATGCTGC ACCGGGCGCG CGCGGTCGGC CAGGCGCTGC TGGCGCGGGG GCTGTCGCCC GAGCGGCCGT TGCTGATCCT GTCGGGCAAC GATCTGCAGC ATCTGCAGCT GGCGCTGGGC GCCATGTATG CCGGCATTCC CTATTGCCCG GTGTCGCCGG CCTACGCGCT GGTGACGCAG GACTACAGCC GGCTCGCCTA CCTGGTGCGG CACCTGACGC CGGGCCTGGT CTATGCCACC GACGGTGCGC TGTTCGCCGG CGCGATCCAG GCGGTGGTGC CGCCGGAGAC CGAGGTCGCG ATCGACCACG GCGAGGTGGC GGGGCGCGCC GTGACCCGGC TGGCGTCGCT GCTCGCGACC GGGCCGGCCG ACGTGGATGC CGCCAACGCC CGCGTGGGCC CCGACACGAT CGCCAAGTTC CTGCTGACCT CGGGCTCGAC GCGCAGCCCC AAGGCGGTCA CCACCACGCA TCGCATGCTG TGCAGCAACC AGCAGATGCT GCTGCAGACC TTTCCCTGCT TCGGCGAGGC GCCGCCCGTG CTGCTGGACT GGCTGCCGTG GAACCACACC TTCGGCGGCA GCCACAACGT GGGCATCGCG CTGTACAACG GCGGCAGCTA CTACATCGAC AGCGGCAAGC CGACACCGCA GGCGTTCGAG CAGACGCTGC GCAACCTGCG CGACGTGCAG CCGACGGTGT ACTTCAACGT GCCCAAGGGC TGGGAGATGC TGACCGACGC GCTCGAGCGC GACCCCGCCC TGCGCGAGCA CTTCTATGCG CGCGTCCGGC TGTTCTTCTT TGCCGGGGCC GGGCTGTCGC AGGCCGCGTG GGACCGGCTC GAGGGCGTGA CCGAGGCCCA CTGCGGCGAG CGCATCCGCA TCATGGCCGG CCTGGGGATG ACCGAGACCG CGCCGTCGTG CACGTTCACC ACCGGCCCGG TCATGATGGC CGGCTACATC GGCCTGCCGG CGCCCGGCTG CGAGGTCAAG CTCGTGCGGG TCGACGGCAA GCTCGAAGCC CGCTTCAAGG GCCCGCATGT CATGCCGGGC TACTGGCGCG CGCCGGAGCT GGCCGCTGAA ACGTTCGACG AAGACGGCTA CTACCGCTCG GGCGACGCCG TGCGCTTCGT CGACGAGGCG CGGCCCGAGA TCGGCCTGAT GTTCGACGGC CGCATCGCCG AGGACTTCAA GCTCAGCTCC GGCACCTTCG TCAGCGTGGG GCCGCTGCGG GCCCGGATCA TCAGCGAGGG CGCGCCCTAC GTGCTCGACG CGGTGATCGC CGGGATGAAC CGCGACGACC TCAGCGTGCT GGTGTTTCCG CGCCTGGAGC ACTGCGCGGC GCTCGCGGGC CTGGGCGCCG GCGCCAGCCC CGCGCAGATC GCCGACAGCC CTGCGGTGCG GGCGTGCTTC GCGGTGCTGC TCGAGCGCCT GAACCGCGCG GCCACCGGCT CGGCCAACCG GATCGCCCGC CTGCGCCTGC TGGAAGAGGC GCCGTCGCTC GACCACGGCG AGGTCACCGA CAAGGGCTCG ATCAACCAGC GCGCCGTGCT CGCCCGCCGG GCGGCGCTGA TCGAGGCGAT CTACGCGGGC GGCGACGGCA AGGTGATGCT GGCGGAGCCG GCCGCTGAGT GTTGA
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Protein sequence | MHMESMKQAA ARYRPVSIGA GTVEVCREAG GAWHLRSAEP IGAYPERMTD CLVRGAGQHP DRVLAAQRGA DGQWERITYA QMLHRARAVG QALLARGLSP ERPLLILSGN DLQHLQLALG AMYAGIPYCP VSPAYALVTQ DYSRLAYLVR HLTPGLVYAT DGALFAGAIQ AVVPPETEVA IDHGEVAGRA VTRLASLLAT GPADVDAANA RVGPDTIAKF LLTSGSTRSP KAVTTTHRML CSNQQMLLQT FPCFGEAPPV LLDWLPWNHT FGGSHNVGIA LYNGGSYYID SGKPTPQAFE QTLRNLRDVQ PTVYFNVPKG WEMLTDALER DPALREHFYA RVRLFFFAGA GLSQAAWDRL EGVTEAHCGE RIRIMAGLGM TETAPSCTFT TGPVMMAGYI GLPAPGCEVK LVRVDGKLEA RFKGPHVMPG YWRAPELAAE TFDEDGYYRS GDAVRFVDEA RPEIGLMFDG RIAEDFKLSS GTFVSVGPLR ARIISEGAPY VLDAVIAGMN RDDLSVLVFP RLEHCAALAG LGAGASPAQI ADSPAVRACF AVLLERLNRA ATGSANRIAR LRLLEEAPSL DHGEVTDKGS INQRAVLARR AALIEAIYAG GDGKVMLAEP AAEC
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