Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSp0162 |
Symbol | egl |
ID | 1222565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 188600 |
End bp | 189862 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637240021 |
Product | endoglucanase precursor (endo-1,4-BETA-glucanase) protein |
Protein accession | NP_521723 |
Protein GI | 17548383 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2730] Endoglucanase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCTGG TTGCCGCTTC GATGGCGGCC CTCATGCTTG CCGGTTGCGG CGGCGGCGAC GGTGACACCA CCCTCAGCAC GGCGGCCGCT ACCGACACCA CGACCCTGAA GACGGCCGCC ACCACCTCGA TCTCGCCGTT GTGGCTCACC ATCGCCAAGG ACAGCGCGGC GTTCACGGTG AGCGGCACGC GCACGGTGCG CTATGGCGCC GGCAGCGCGT GGGTGGCGAA GAGCATGTCC GGCACAGGCC AGTGCACCGC CGCCTTCTTC GGCAAGGATC CGGCGGCCGG TGTCGCCAAG GTATGCCAGG TGGCGCAGGG CACGGGCACC TTGCTGTGGC GCGGCGTCAG CCTGGCCGGC GCCGAGTTCG GGGAGGGCAG CCTGCCGGGC ACCTACGGGA GCAACTACAT CTATCCGTCC GCCGACAGCG CGACCTACTA CAAGAACAAG GGCATGAACC TCGTGCGCCT GCCGTTCCGC TGGGAGCGGC TGCAGCCCAC GCTCAACCAG GCGCTCGACG CGAACGAGCT GTCGCGCCTG ACCGGGTTCG TCAACGCCGT GACGGCGGCC GGCCAGACGG TGCTGCTCGA TCCGCACAAC TACGCGCGCT ACTACGGCAA CGTGATCGGC TCGAGCGCGG TGCCCAACAG CGCGTACGCC GATTTCTGGC GGCGCGTGGC CACCCAGTTC AAGGGCAATG CCCGCGTCAT CTTCGGGCTG ATGAACGAGC CCAATTCGAT GCCGACCGAG CAGTGGCTGT CCGGCGCCAA CGCCGCGCTG GCCGCAATCC GCTCGGCCAA TGCGAGCAAC GTGGTGTTCG TGCCCGGCAA CGCCTGGACG GGCGCGCACA GCTGGAACCA GAACTGGTAC GGCACGCCGA ACGGCACCGT CATGAAGGGC ATCAATGACC CGGGCCGCAA CCTCGTCTTC GAGGTGCACC AGTACCTGGA CGGCGATTCG TCCGGCCAGT CGGCCAGCTG CGTGAGCGCC ACCATCGGCG CCGAGCGGCT GCAGGACTTC ACCAACTGGC TGCGCAGCAA CGGCTATCGC GGCTTCCTGG GCGAGTTCGG CGCGGCCTCC AACGACACCT GCAACCAAGC GGTTGCCAAC ATGCTCACCT TCGTGAAGAA CAATGCCGAT GTCTGGACCG GCTGGGCGTG GTGGGCGGGC GGTCCGTGGT GGGGCGGCTA CATGTACTCG ATCGAGCCGT CGAACGGCGT GGACAAGCCG CAGATGTCGG TGCTGGCGCC GTACCTGAAG TAA
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Protein sequence | MPLVAASMAA LMLAGCGGGD GDTTLSTAAA TDTTTLKTAA TTSISPLWLT IAKDSAAFTV SGTRTVRYGA GSAWVAKSMS GTGQCTAAFF GKDPAAGVAK VCQVAQGTGT LLWRGVSLAG AEFGEGSLPG TYGSNYIYPS ADSATYYKNK GMNLVRLPFR WERLQPTLNQ ALDANELSRL TGFVNAVTAA GQTVLLDPHN YARYYGNVIG SSAVPNSAYA DFWRRVATQF KGNARVIFGL MNEPNSMPTE QWLSGANAAL AAIRSANASN VVFVPGNAWT GAHSWNQNWY GTPNGTVMKG INDPGRNLVF EVHQYLDGDS SGQSASCVSA TIGAERLQDF TNWLRSNGYR GFLGEFGAAS NDTCNQAVAN MLTFVKNNAD VWTGWAWWAG GPWWGGYMYS IEPSNGVDKP QMSVLAPYLK
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