| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp0122 |
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| Symbol | prpB |
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| ID | 1222525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 140889 |
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| End bp | 141785 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637239981 |
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| Product | 2-methylisocitrate lyase |
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| Protein accession | NP_521683 |
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| Protein GI | 161621738 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2513] PEP phosphonomutase and related enzymes |
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| TIGRFAM ID | [TIGR02317] methylisocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.528863 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCACAA GCAAACGACA CCCCGCCAGC GCCGGCGCCC GGTTCCGCCA GGCCGTGGCC
GAATCCCAGC CGCTGCAAGT GGTGGGCGCC ATCACCGCCT ATGCCGCCAG GATGGCGGAG
CAGACCGGCT TCAAGGCCGT CTACCTCTCG GGCGGCGGCG TGGCCGCCAA TTCGCTGGGC
ATGCCGGACC TGGGCATCAG CACCATGGAC GATGTGCTGA TCGATGCCCG CCGCATCACC
GATGCGGTCG GCATTCCGCT GCTGGTGGAC ATCGACACCG GCTGGGGCGG CGCCTTCAAT
ATCGCGCGCA CCGTCCGTTC GTTCATCAAG GCCGGCGTGG CGGCCGTGCA CCTGGAAGAC
CAGGTGGGCC AGAAGCGCTG CGGCCACCGG CCGGGCAAGG AGGTCGTCTG CGCCGATGAG
ATGGTCGACC GCGTGAAGGC CGCCGTCGAT GCCCGCACCG ACGACGATTT CGTCATCATG
GCGCGCACCG ACGCGGCGGC CTCCGAGGGC CTCGATGCCG CCATCGCGCG CGCGGTGGCC
TATGTGGAAG CCGGCGCGGA CATGATCTTT CCGGAAGCGA TGAAGACGCT GGACGACTAC
CGCCGCTTCA AGGCCGCCGT GAAGGTGCCG ATCCTGGCCA ACCTGACGGA GTTCGGCAGC
ACGCCGCTCT TCACGGTGGA CGAACTGCGC GGCGCGGACG TGGACATCGC GCTGTACTGC
TGCGGCGCGT ATCGCGCGAT GAACGCGGCG GCGCTCGGCT TCTACCGGAC GGTGATGCGC
GACGGCACGC AGCAGGCGGC GGTGCAGACC ATGCAGACCC GCGCGGACCT GTACCACTAT
CTCGGCTACC ACGCGTACGA AGACAAGCTC GACGCCCTGT TCGCCGCGCA GAAGTAG
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| Protein sequence | MSTSKRHPAS AGARFRQAVA ESQPLQVVGA ITAYAARMAE QTGFKAVYLS GGGVAANSLG
MPDLGISTMD DVLIDARRIT DAVGIPLLVD IDTGWGGAFN IARTVRSFIK AGVAAVHLED
QVGQKRCGHR PGKEVVCADE MVDRVKAAVD ARTDDDFVIM ARTDAAASEG LDAAIARAVA
YVEAGADMIF PEAMKTLDDY RRFKAAVKVP ILANLTEFGS TPLFTVDELR GADVDIALYC
CGAYRAMNAA ALGFYRTVMR DGTQQAAVQT MQTRADLYHY LGYHAYEDKL DALFAAQK
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