| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp0064 |
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| Symbol | opuC |
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| ID | 1222612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 73543 |
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| End bp | 74412 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637239923 |
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| Product | putative glycine betaine transmembrane and periplasmic ABC transporter protein |
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| Protein accession | NP_521625 |
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| Protein GI | 17548285 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.321585 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTTC TCGAAAAACT GGTATTTGCC AGTGCAGCAT CCGTGATGTT GACGTGGAGC
GCGTTCGCGC TGGGAGCGAC CAAGCCGGGC TTGAAGATCG GCTATGTCGA GGGGTGGGAC
GACAGCGTTG CAACAACGAA CGTCGCCGCA CGCATCATTG AGAAGAAGCT GGGCTATCCG
GTGCAACTGG TGCCCGTGGC CGCTGGCGTC ATGTGGCAAG GGGTGGCTCG CGGCGATCTG
GACGCGACGC TGTCTGCGTG GTTGCCCGTC ACGCAGGGCG CCTACTGGGA TCAGTTCAAG
ACCAAAGTGG TCGATCTCGG CCCGAACTTC ACGGAAGCGC GCATCGGCCT GATCGTCCCC
GAATCCGCGG GCGCAAAGAC CATTGAAGAT CTGAACGCGC AGAAGTCGGC GTTCGAGGGT
CGCATCGTCG GCATTGATGC TGGTGCCGGC GTGATGCGCA AGGCGGGTGA CGCAATCAAG
TCTTACGGGC TCAATTACTC CCTGATGCCG AGTTCGGGCA GCGCGATGAC GGCAGAGCTC
GCGCGGTCGA TGAACGCGAA CAAGCCGATT GTCGTGACCG GCTGGGCCCC GCACTGGATG
TTTGCAAAGT GGAAGCTGCG CTTCCTGGAA GATCCGAAGA AGGTCTTCGG TGACTCGGAA
CACGTCGACA ACGTCGTCAA TCCGGGGCTT GAAACCAAGG CGAAGCCGGT CGTCACGTTC
CTGAAGAAGT TTCAGTGGAA GCCGGGTGAG ATCGATAGCG TGATGCTGGC GATCCAGAAC
GGCACGAAGC CGGATGCGGC GGCCGATGCA TGGATCGCTG CGCACGCGGA CCGTGTGAAT
GCGTGGCTCG AAGGCACGCA GTCACAGTAA
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| Protein sequence | MKFLEKLVFA SAASVMLTWS AFALGATKPG LKIGYVEGWD DSVATTNVAA RIIEKKLGYP
VQLVPVAAGV MWQGVARGDL DATLSAWLPV TQGAYWDQFK TKVVDLGPNF TEARIGLIVP
ESAGAKTIED LNAQKSAFEG RIVGIDAGAG VMRKAGDAIK SYGLNYSLMP SSGSAMTAEL
ARSMNANKPI VVTGWAPHWM FAKWKLRFLE DPKKVFGDSE HVDNVVNPGL ETKAKPVVTF
LKKFQWKPGE IDSVMLAIQN GTKPDAAADA WIAAHADRVN AWLEGTQSQ
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