| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp0008 |
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| Symbol | dctB1 |
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| ID | 1222637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 9390 |
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| End bp | 11294 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637239867 |
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| Product | C4-dicarboxylate transport sensor kinase transcription regulator protein |
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| Protein accession | NP_521569 |
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| Protein GI | 17548229 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.368078 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCTG ACGGCCACGC CGATCCTGCA CACGCCGCGC GCGGACGCGG GCTGCGGCTG
GCCGTCGCGC TGGCGATGGC GGCCTGCTGC GCGGCGGCGG GATGGGGCGC CTATGCCCTC
GCCCTGCAGC GCTACGTGGC CGCGCGCGCC GAAGAGGCCG GCCAGCGCAC CACGTTCTAT
GCCCAGAACC TGCGCGGCAC GCTGGCGCGC TACGAGTCGC TGCCGCGGCT GGCCGCGCTG
GAGCATGTGC TGCATGTCGC GCTGACGGCG CCGCATGCGC GCGATGCCGC ACTGCGCCGT
GCCGCCGACG CTTATTTGAA GGAAGTCCAG GCCGCGGCCG ACCTGACCGC CGTCTACCTG
ATGGACGCCA CCGGCCAGAC CCTCGCCGCG AGCAACTGGG ACCTGCCCTC GTCGTTCATC
GGGCGGAACT ATGCGTTCCG GCCGTACTTT GTCGACGCCA TGCGCGAGGG GTTCGGCCGC
TTCTACGGCG TGGGCAACAC GACCGGCGAG ACCGGCTACT TCCTGGCCGC GCCCGTGCGC
GAGGGCGGCC AGCCCATCGG CGCGCTGGCG GTCAAGATCA ACCTGGATTC GTTCGAGGCG
ACGCTGGCGC GCAGCGGCGA TACCGTGCTG CTGGTCGATC GCCATGGCGT GATCTTTCTG
TCGTCGGTGC CCGAGTGGAA GTACCGTACG CTCGGCACGC TGAGCGCGGC GCAGCGCGCA
GCGCTGGATG CGACGCGGCA ATACGGGCCG CACGCGCTGG CGCCGCTCGA TCCGCGGGCC
GGGAGCGTAC CCTTTTCTGC GGACCAGGTG CCGCAGACGC TGCGCGTGGC GTTGCCCGGC
CGCTCGGTGT CAACGCTGCG GGTGCAATAT CGGCCGGTCG GCCTGCTCGG CTGGCAGGTT
GCCGTGCTGA TCGATCCGCG CGACGAGCGG CGGACCGCGC TGGTGGCCGG CGCCAGCGCC
GCGTTTGCGA CGGCGCTGGC TTTTGCGGTG TGCGTTGCGC TGCGGCTGCG GGCGCGGCGG
CACGAGGAGC AGCGCCGTGC CCGCGCCGCG CTGCGAGAAG TCCAGCGCGA CCTGGAGGCG
CGCATTGCCC AACGCACCGC CGAGCTGACC TCGGCCAATG CGGCGCTCGC CTCCAAGGTG
GAGGCGCTCG ACACCGCGCA GCGCATCCTG CGCGAGACGC GCGATGCCGC CGTGCAGGCC
GGCAAGCTGG CCGTGCTGGG CCAGATGGCC GCCGGCATCA CACATGAGCT GAACCAGCCG
CTGACCGCGC TGACCACGCT GTCCGACAAC GCCAACCAGC TTGCCGAGCG TGGCCGTGTC
GACGAGGTGC GCGGCAATCT CGCGCACATC AGCCAGCTCG CGCATCGCAT GGGCCGCATC
GTGTCGCACA TCAAGGGGTT CGCCCGCAAG GGCGACGCGG CACGCGCGGC CGTGCCGGTG
GAGGAGGCGA TCCGCCAGGC GCTGATGCTG GTGGAGACGC GCCGCCGCCA GGCGGGCGTG
CCGGTGGTGG TCGGGCCGGT GCCGCCCGGC GTGGCGGTGT GGGCCAACGC GGTGCGGCTG
GAGCAGGTGC TGGTCAACCT GATCCGCAAC GCCATCGATG CCACCGCCGA GGCGCCGCGG
CCGGAGGCTG CCGGCGTGCG GGTCACGGCG CAGGCGGACG ATGCGCTCGT GCGCATCACC
GTGCGCGACG CCGGCCCGGG CATCGCGCCG GAGGTGTTGC CGCATCTGTT CGAACCGTTT
TTCACCACCA AGGCGGACGG CCAGGGCCTC GGCCTCGGGC TGGCGATTTC GCTGGCGATC
GTTGAAGATT TCGGCGGGCG GCTGGAAGGC CGCAATGCCG ACGACGGTGC GGGCGGTGCC
GCGTTCGTCA TCGAGCTGGA ACGTGCCATG GAGCCGCATG CCTGA
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| Protein sequence | MSADGHADPA HAARGRGLRL AVALAMAACC AAAGWGAYAL ALQRYVAARA EEAGQRTTFY
AQNLRGTLAR YESLPRLAAL EHVLHVALTA PHARDAALRR AADAYLKEVQ AAADLTAVYL
MDATGQTLAA SNWDLPSSFI GRNYAFRPYF VDAMREGFGR FYGVGNTTGE TGYFLAAPVR
EGGQPIGALA VKINLDSFEA TLARSGDTVL LVDRHGVIFL SSVPEWKYRT LGTLSAAQRA
ALDATRQYGP HALAPLDPRA GSVPFSADQV PQTLRVALPG RSVSTLRVQY RPVGLLGWQV
AVLIDPRDER RTALVAGASA AFATALAFAV CVALRLRARR HEEQRRARAA LREVQRDLEA
RIAQRTAELT SANAALASKV EALDTAQRIL RETRDAAVQA GKLAVLGQMA AGITHELNQP
LTALTTLSDN ANQLAERGRV DEVRGNLAHI SQLAHRMGRI VSHIKGFARK GDAARAAVPV
EEAIRQALML VETRRRQAGV PVVVGPVPPG VAVWANAVRL EQVLVNLIRN AIDATAEAPR
PEAAGVRVTA QADDALVRIT VRDAGPGIAP EVLPHLFEPF FTTKADGQGL GLGLAISLAI
VEDFGGRLEG RNADDGAGGA AFVIELERAM EPHA
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