| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3440 |
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| Symbol | gyrB |
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| ID | 1222304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3710650 |
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| End bp | 3713178 |
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| Gene Length | 2529 bp |
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| Protein Length | 842 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637239857 |
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| Product | DNA gyrase subunit B |
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| Protein accession | NP_521559 |
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| Protein GI | 17548157 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.683175 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.447385 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAC AGCAGAAACC GCAATCCACA CCCGCCGAAA GCAGCAGCTA CGGCGCCGCC
TCGATCCAGA TCCTGGAAGG CCTGGAGGCG GTGCGCAAGC GGCCGGGCAT GTACATCGGC
GATACGTCGG ACGGCACCGG CCTGCACCAC CTCGTGTTCG AGGTGCTGGA CAACTCCATC
GACGAGGCGC TGGCGGGGCA TTGCACCGAG ATCCACGTCA CCATCCACAC CGACAACTCG
ATCTCCGTGA TCGACAACGG CCGCGGCATC CCGACCGGCA TCAAGTTCGA TGACAAGCAC
GAGCCGAAGC GCAGCGCGGC CGAGATCGTC ATGACCGAGC TGCACGCCGG CGGCAAGTTC
GACCAGAACA GCTACAAGGT GTCGGGCGGC CTGCACGGCG TGGGTGTGTC GTGCGTGAAC
GGCCTGTCGA AGTGGCTCAA GCTGACGGTG CGCCGCGACG GCCGCGTGCA CCACATGGAA
TTCGCGCGCG GCATCCCGCA GAACCGCCTG CTGGAGCCGG CCGAGGCGCC GGACGGCAAG
ACGGTCGAAG TGTCGCCGCT GCGCGTGTCG GGCACCACCG ACAAGCGCGG CACCGAAGTG
CACTTCCTGG CCGACGAAGA GATCTTCACC AACGTCGAGT ACCACTACGA GATCCTCTCC
AAGCGCATCC GCGAGCTCTC GTTCCTGAAC AACGGTGTGC ACATCAAGCT GACCGACCAG
CGCACCGGCA AGGAAGAAGA CTTCGCCTTC TCGGGCGGCG TGAAGGGCTT CGTCGAGTAC
ATCAACAAGA ACAAGACCGT GCTGCACCCG ACCGTCTTCA ACGCCACGGG CGAGAAGGAC
GGCGTGGGCG TGGAAGTGTC GATGCAGTGG AACGACGGCT TCAACGAGCA GGTGCTCTGC
TTCACCAACA ACATCCCGCA GCGCGACGGC GGCACCCACC TGACCGGCCT GCGCGCCGCG
ATGACGCGCG TCATCAACAA GTACATCGCC GACAACGAGA TCGCCAAGAA GGCCAAGGTC
GAAACCTCCG GCGATGACAT GCGCGAAGGC CTGACCTGCG TGCTGTCGGT GAAGGTGCCC
GAGCCCAAGT TCAGCTCGCA GACCAAGGAC AAGCTCGTTT CGTCCGAAGT GCGCCTGCCG
GTGGAAGAAG TCGTGGCCAA GGCGCTGGCG GACTTCCTGC TGGAAACGCC CAACGACGCC
AAGATCATCT GCGGCAAGAT CGTTGAAGCC GCCCGCGCCC GCGAAGCCGC CCGCAAGGCC
CGCGAGATGA CGCGCCGCAA GGGCGTGCTC GACGGCATGG GCCTGCCCGG CAAGCTGGCC
GACTGCCAGG AGAAAGACCC GGCGCTGTCC GAACTGTTCA TCGTCGAGGG TGACTCCGCA
GGCGGCTCGG CCAAGCAGGG CCGCGACCGC AAGTTCCAGG CGATCCTGCC GCTCAAGGGC
AAGATCCTGA ACGTGGAACG CGCGCGCTTC GACAAGATGC TCTCCAGCCA GGAAGTGCTC
ACGCTCATCA CCGCCATGGG CACCGGCATC GGCAAGGACG ACTACAACCT CGACAAGCTG
CGCTACCACC GCATCATCAT CATGACCGAC GCGGACGTGG ACGGCTCGCA CATCCGCACG
CTGCTGCTGA CGTTCTTCTA CCGCCAGATG CCCGAGATCA TCGAGCGCGG CCACGTGTAC
ATCGCCCAGC CGCCGCTGTA CAAGATCAAG CACGGCAAGG AAGAGCGCTA CATCAAGGAC
GACGTCGAGA TGGCCGCGTA CCTGATGCGC CAGGCCCTCG ACACCGCCAT CCTGGTGCGC
GCCGACGGCA CCGAGATCGC CAGCGACGCG CTGGCCGAGC TGGCGCGGCA GTACCAGTTC
TCGCGCGCCG TGATCGAGCG ACTGTCGCGC GTGATCGATG CGGATGCGCT GCGCGCCATT
GCCGAAGGCG TGGCGCTGGA CCTGTCCAGC GAAGCGGGCG CCGAAGCCAG CGCCAAGGCG
CTCAAGGCGC GGCTGCTGGA AATGCAGGGC AACGCCAGCA GCGCCAACGG TGGCGCGACG
GCGGATGCGT TCATGCAGTA CGACGAGAAG CACGAGAAGT ACCGCGTGAT GGTCGTGCGC
CGCCAGCACG GCAACCAACG CCTATCGCAC ATCGACGCCG ACTTCGTGGC CGGCGCCGAC
TACGCCACGC TGTCGCAGAC TGCGCAGACC TTCCAGGGGT TGATCGGGGA GGGGGCCAAG
GTGCGGCGTG GGACTGGGGA TAAGCAGCGC GAGCAGGGTG TGACGGACTT CCATGCGGCG
ATTACTTGGC TGCTGGGTGA GGCTGAGCGT GGCATCAGCC GGCAACGTTA TAAGGGGCTG
GGGGAGATGA ACCCCTCGCA GCTGTGGGAG ACCACTATGG ATGTTACGCA GCGGCGACTG
CTCAAGGTGC AGATTGAAGA CGCTATTGCG GCGGATCAGA TCTTTACTAC GCTGATGGGG
GATGACGTGG AGCCTCGGCG GAACTTTATT GAGAGTAATG CGTTGGTGGC GCGGAATATT
GATGTTTGA
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| Protein sequence | MTEQQKPQST PAESSSYGAA SIQILEGLEA VRKRPGMYIG DTSDGTGLHH LVFEVLDNSI
DEALAGHCTE IHVTIHTDNS ISVIDNGRGI PTGIKFDDKH EPKRSAAEIV MTELHAGGKF
DQNSYKVSGG LHGVGVSCVN GLSKWLKLTV RRDGRVHHME FARGIPQNRL LEPAEAPDGK
TVEVSPLRVS GTTDKRGTEV HFLADEEIFT NVEYHYEILS KRIRELSFLN NGVHIKLTDQ
RTGKEEDFAF SGGVKGFVEY INKNKTVLHP TVFNATGEKD GVGVEVSMQW NDGFNEQVLC
FTNNIPQRDG GTHLTGLRAA MTRVINKYIA DNEIAKKAKV ETSGDDMREG LTCVLSVKVP
EPKFSSQTKD KLVSSEVRLP VEEVVAKALA DFLLETPNDA KIICGKIVEA ARAREAARKA
REMTRRKGVL DGMGLPGKLA DCQEKDPALS ELFIVEGDSA GGSAKQGRDR KFQAILPLKG
KILNVERARF DKMLSSQEVL TLITAMGTGI GKDDYNLDKL RYHRIIIMTD ADVDGSHIRT
LLLTFFYRQM PEIIERGHVY IAQPPLYKIK HGKEERYIKD DVEMAAYLMR QALDTAILVR
ADGTEIASDA LAELARQYQF SRAVIERLSR VIDADALRAI AEGVALDLSS EAGAEASAKA
LKARLLEMQG NASSANGGAT ADAFMQYDEK HEKYRVMVVR RQHGNQRLSH IDADFVAGAD
YATLSQTAQT FQGLIGEGAK VRRGTGDKQR EQGVTDFHAA ITWLLGEAER GISRQRYKGL
GEMNPSQLWE TTMDVTQRRL LKVQIEDAIA ADQIFTTLMG DDVEPRRNFI ESNALVARNI
DV
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