| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3412 |
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| Symbol | cheD4 |
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| ID | 1222276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3688152 |
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| End bp | 3689699 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637239829 |
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| Product | putative methyl-accepting chemotaxis I (serine chemoreceptor) transmembrane protein |
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| Protein accession | NP_521531 |
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| Protein GI | 17548129 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.934147 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGCAACT GGACCGTCAA GAGAAAGCTT GCCACCCTGG TCGCCTCGAT CATCATTGCC
TTCGTGTGCC TGACCGTCTT CCTGCTCGGG CGCCAGGCCG CCGCGACGGC GGACATCCGG
AGCCTGTACG ACAAGGACTA TCGCGCGGCG TCGATCATCG GCCAGATCGA CGGGCTGCTC
ACCCGCGTGG ATATCAACAT CCTGCGGATG ATCGCCATCG GCGATCCGGC TTCCATCTCG
GGCTGGAAGG CCCAGAACAC GGAGCGTTTC AACAAGGTCG ACCAACTGCT GGTGGAGTTG
GACGCATCGG CCGACCCGAG CATGGCGGCA TCGATCAAGA CCCTGGGCGA GGCCTATGGC
CGCATGCGCA AGGGCATGGA GCACCAGGTC GAGGCGGTCG AGGCGGGTGA TATCAAGCGC
GGCGGCGAGA TCAACAAGAA CGAGGTCAAG GACAACGCCG ACAAGACGTT CGGCACGCTG
GCCGAGCTCA AGAGCGCGCA GGACCTGATC GCCAAGAACA AGGTCCAGGC CCAGGAAGCG
GCGGCGGCAT TGGCCCGCGT GGTCTCGATC ACGGCGGCGG CGCTGATCGC GCTCGGCTCG
CTGGGTCTCG GGCTGCTGAT GCTGCGCGAC CTGCTGCGCC AGCTCGGCGG CGAGCCGTCG
GTGGCGGCCC AGGCGGTCAG CGCCATGGCG CAGGGCGACC TTTCCCGCGT GATTGCCGTC
GACGCAGACG ATAGGACGAG CCTGCTGGCC AAGCTCAAGG AGATGCAGGC GTCGCTGTCC
GGCATCGTGG CCACCGTGCG CAACAACGCC GAAAGCGTGG CCACGGCCAG CGCCCAGATC
GCGCAGGGCA ATCAGGACCT GAGCCATCGC ACCGAGCAGC AGGCCAGCGC GCTGCAGGAG
ACGTCGGCGA CGATGGATGA GCTGGGCTCG ACCGTGGGCA ACAATGCCGA GAACGCGCGC
CAGGCCAATC AGCTCGCGTC GGGGGCCTCC AGCGTTGCCG CCGAGGGTGG CGAGGTGGTC
AGCCAGGTGG TCGGCATGAT GAAGGGGATC AACGATGGCT CCAAGAAGAT CGCCGACATC
ATCGGCGTCA TCGACGGCAT TGCGTTCCAG ACCAACATTC TGGCGTTGAA CGCCGCGGTG
GAGGCCGCAC GCGCGGGCGA GCAGGGCCGC GGGTTCGCGG TGGTCGCCGC CGAGGTGCGC
AGCCTGGCGC AGCGCAGTGC CGCGGCTGCC AAGGAAATCA AGGCGTTGAT CACGAGCAGT
GTCGAGCAGG TTGAACAGGG CACCACGCTG GTCGACCGGG CCGGCGCGAC GATGGAACAG
ATCGTGGGCG CGATCCAGCG CGTGTCCAAC ATCGTCGCCG AGATCAGCTC GGCCAGCGCG
GAGCAGAGCT CCGGCGTCTC GCAGGTCGGC CAGGCCGTCA GCCAGATGGA CGAGGCCACG
CAGCAGAACG CCGCGCTGGT CGAGCAAAGC GCGGCGGCCG CGAGCAGCCT GCAAGGCCAG
GCACAGCAGC TCGTGCAGGC CGTCGCGGTG TTCAAGCTGG CGCGGTAG
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| Protein sequence | MRNWTVKRKL ATLVASIIIA FVCLTVFLLG RQAAATADIR SLYDKDYRAA SIIGQIDGLL
TRVDINILRM IAIGDPASIS GWKAQNTERF NKVDQLLVEL DASADPSMAA SIKTLGEAYG
RMRKGMEHQV EAVEAGDIKR GGEINKNEVK DNADKTFGTL AELKSAQDLI AKNKVQAQEA
AAALARVVSI TAAALIALGS LGLGLLMLRD LLRQLGGEPS VAAQAVSAMA QGDLSRVIAV
DADDRTSLLA KLKEMQASLS GIVATVRNNA ESVATASAQI AQGNQDLSHR TEQQASALQE
TSATMDELGS TVGNNAENAR QANQLASGAS SVAAEGGEVV SQVVGMMKGI NDGSKKIADI
IGVIDGIAFQ TNILALNAAV EAARAGEQGR GFAVVAAEVR SLAQRSAAAA KEIKALITSS
VEQVEQGTTL VDRAGATMEQ IVGAIQRVSN IVAEISSASA EQSSGVSQVG QAVSQMDEAT
QQNAALVEQS AAAASSLQGQ AQQLVQAVAV FKLAR
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