Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3408 |
Symbol | |
ID | 1222272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3684776 |
End bp | 3685537 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637239825 |
Product | ABC transporter ATP-binding protein |
Protein accession | NP_521527 |
Protein GI | 17548125 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.711353 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAGA TCCGCGAGCT GCAGAAGCAC TTTGGCGAGC ACCACGTGCT GCGCGGCGTG AGCCTGCGCG TGGACAAGGG CGAGGTGGTG TGCCTGATCG GCCCGTCGGG CTCGGGCAAG TCGACCGTCC TGCGCTGCAT CAACGGGCTG GAGTCGTACG ACGGCGGCGA GATCCGCGCC TTCGGCGAGC GCGTGGACCG CGACGGCAAG GCCATCCACA CGCTGCGCAG CCGCATGGGC ATGGTGTTCC AGCGCTTCAA CCTGTTCCCG CACCGCAGCG TGCTGGAGAA CGTGATGGAA GGCCCGGTCT ACGTGAAGGG CGAACGGCCC GATGCAGCGC GCGCCAAGGC CATGGCGCTG CTGGAGAAGG TGGGCCTGGC CGCCAAGGCG CAGGCCTACC CGGCCCAGCT CTCCGGCGGC CAGCAGCAGC GCGTGGCGAT CGCCCGCGCG CTGGCGATGG AGCCCGAGGC GATGCTGTTC GACGAGCCCA CCTCGGCGCT GGACCCGGAG CTGGTCGGCG ATGTGCTGGA GGTGATGCGC GCGCTGGCCC GCGAGGGCAT GACGATGATC GTCGTCACGC ACGAGATGGG CTTCGCGCGC GAGGTGGCCG ACCGGGTGTG CTTCCTGCAC AGCGGCACCA TCGTCGAGGA AGGGCCGGCC GCGCAGGTGC TGGGCGCGCC GCGCCAGCCG CGCACGCAGG ACTTCCTGCG CCGCGTGCTG CACAAGCCGG CCGAGCCGGC CACGGGAGAC CTGGCGCTAT GA
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Protein sequence | MIEIRELQKH FGEHHVLRGV SLRVDKGEVV CLIGPSGSGK STVLRCINGL ESYDGGEIRA FGERVDRDGK AIHTLRSRMG MVFQRFNLFP HRSVLENVME GPVYVKGERP DAARAKAMAL LEKVGLAAKA QAYPAQLSGG QQQRVAIARA LAMEPEAMLF DEPTSALDPE LVGDVLEVMR ALAREGMTMI VVTHEMGFAR EVADRVCFLH SGTIVEEGPA AQVLGAPRQP RTQDFLRRVL HKPAEPATGD LAL
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