| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3404 |
|---|
| Symbol | |
|---|
| ID | 1222268 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 3681029 |
|---|
| End bp | 3681694 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637239821 |
|---|
| Product | response regulator transcription regulator protein |
|---|
| Protein accession | NP_521523 |
|---|
| Protein GI | 17548121 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGTCC TGCTGATCGA AGACGATCCG ATGATCGGCG CGGTGGTGGA GGCCGCGCTG
CGCGATGCCG CCTATGCGGT GGACTGGGTG CGCGACGGCC GGACCGCCGT CGACGTGAGC
GCGCACCAGC ACTACGACCT GCTGCTGCTC GACCTCGGCC TGCCGGGCCA GGACGGCCAC
GCGGTGCTGC GCACGCTGCG CGCGCGGGAC AACCCGGTGC CGGTGCTGAT CCTCACCGCG
CGCGATGCGG TGGACGAGCG CGTGCGCGGC CTGGACGGCG GCGCCGACGA CTACGTGCTC
AAACCCTTCG AGATGGTGGA ACTGCTGGCG CGCATGCGCG CCGTGCTGCG CCGCCGGGGC
GGGGCCGCCA GCCCGGTGCT GAGCAACGGC GTGCTGTCGC TCGACCCGGC CACGCACGAG
GTGCGCGCGG GCGACGGCGA GCCGGTGCGC CTGTCGGGCC GCGAGTTCGC GCTGCTGCAA
GCGCTGATGC TGCGGCCCGG CGCCATCCTG TCGCGCGGCG AGCTGGAGGA GCGCATCTAC
GGCTGGGGCC ACGAGGTGGC CAGCAACGCG GTCGAGTTCC TCATCCACGC GCTGCGCAAG
AAGCTGGGCG CGGAATCGAT CAAGAACGTC AGGGGCGTGG GATGGATGGT GTCCAAGGGC
CGGTGA
|
|---|
| Protein sequence | MRVLLIEDDP MIGAVVEAAL RDAAYAVDWV RDGRTAVDVS AHQHYDLLLL DLGLPGQDGH
AVLRTLRARD NPVPVLILTA RDAVDERVRG LDGGADDYVL KPFEMVELLA RMRAVLRRRG
GAASPVLSNG VLSLDPATHE VRAGDGEPVR LSGREFALLQ ALMLRPGAIL SRGELEERIY
GWGHEVASNA VEFLIHALRK KLGAESIKNV RGVGWMVSKG R
|
|---|
| |