Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3382 |
Symbol | kdpA |
ID | 1222246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 3641797 |
End bp | 3643569 |
Gene Length | 1773 bp |
Protein Length | 590 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637239799 |
Product | potassium-transporting ATPase subunit A |
Protein accession | NP_521501 |
Protein GI | 17548099 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2060] K+-transporting ATPase, A chain |
TIGRFAM ID | [TIGR00680] K+-transporting ATPase, KdpA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATGCGT TCCTCCTCCA GCTGGCGATC TACCTGGCCG TGCTGCTGGT CCTGGCCCGG CCGCTCGGCA CCTACATGGC CCGCGTGTTC GGCGATGCGC CATCGCGTGC GCACTGGCTG CGGTCGGTCG AGCGGTTGCT GTATCGCGTC GCGGGCGTCG ATCCGCGTGC GGAGATGGGC TGGAAGCACT ACGCGCTGGC GGTCATCGCC GTCAACGTGC TGGGTGCGCT GGCGGTCTAT GCGCTGCAGC GCCTGCAGCC GTGGCTGCCG CTGAACCCGC AGGGCTTCGG CGCCGTCACG CCGGATTCGT CGTTCAACAC GGCGGTCAGC TTCGTTACCA ACACCAACTG GCAGGGCTAC TCGGGCGAAA GCACGATGAG CTACCTGACG CAGATGCTCG GGCTGGCGGT GCAGAACTTT CTGTCGGCGG CCACCGGCAT CGCGGTGGTG ATCGCGCTGA TCCGCGGCTT CGCCCGCCAT TCGGCCCGCA CCATCGGCAA CTTCTGGGTG GATTTCACGC GCGGCACGCT GTACGTGCTG CTGCCGCTGT CGGTGATCGT GGCGGTGTTC TTCGTGAGCC AGGGCGCGAT CCAGAACTTC GACGCCTACA AGGAGGTGAC CACCGTCGCC GCCACCACCT ACGACAACCC GAAGACCGAC GCGCAAGGCA ACCCGATCAA GGATGCCCAG GGCAACCCGG TGACGGAGAA GGCCACCACG CAGAAGCAGA CCCTGCCGAT GGGCCCGATC GCCTCGCAGG AGGCGATCAA GATGCTCGGC ACCAACGGCG GCGGCCCGTT CAATGCCAAC TCCGCGCATC CGTACGAGAA CCCGACACCG CTGGCCAACT TCGTGCAGAT GCTGTCGATC TTCCTCATCC CGGCGGCGCT GTGCTTCACC TTCGGCGCGA TGGTGGGCGA CCGGCGCCAG GGCTGGGCGG TGCTGGCCTC GATGACGATT CTCTTCGTCG TGCTGGCCGT GTTCGAGATG TGGGCGGAGC TGCATGCCAA CCCGATGCTC GCCCACCTCG GCGTGGACCA GGCCGTCGGC AACATGGAGG GCAAGGAAAC GCGCTTCGGT GTCGTCGCCT CGTCGCTGTT CGTCACCATC ACCACGGCGG CATCATGCGG CGCGGTCAAT GCGATGCACG ATTCGCTGAC GGCGCTGGGC GGGTTCGTGC CGATGTTCCT GATCCAGCTG GGCGAGGTGG TCTTCGGCGG CGTGGGCTCG GGCCTGTACG GCATGCTGGT GTACGCCATC CTGGCGGTGT TCATCGCCGG CCTGATGATC GGCCGCACGC CGGAATACCT CGGCAAGAAG ATCGAAGTGT TCGAGATGAA GATGACCTCC ATCGCGATCC TCGTCACGCC GCTGCTGGTG CTGGTGGGCA CGGCCGTCGC GGTGCTGGCC TCGGGAGGCC GCGCCGGCAT CTTCAACCCC GGCACGCACG GCTTCTCGGA GGTGCTGTAC GCCTTCTCGT CGGCCGCCAA CAACAACGGC AGCGCGTTCG CGGGGCTGTC GGCCAACACG CCGTTCTACA ACGTCGCGCT GGGCATCGTG ATGTGGCTGG GCCGCTTCTG GATCATCGTG CCGGTGCTGG CCATGGCCGG GACGTTCGCC GCCAAGAAGC GCCTGCCCGT GACGGTCGGC ACGCTGCCCA CGCATGGCCC GCTGTTCGTC GTGCTGCTGA TCGGCTCCGT GCTGCTGGTG GGCGCGCTCA CCTATATCCC GGCGCTGGCG CTGGGCCCCA TCGCGGAACA TCTCGCGCGC TGA
|
Protein sequence | MNAFLLQLAI YLAVLLVLAR PLGTYMARVF GDAPSRAHWL RSVERLLYRV AGVDPRAEMG WKHYALAVIA VNVLGALAVY ALQRLQPWLP LNPQGFGAVT PDSSFNTAVS FVTNTNWQGY SGESTMSYLT QMLGLAVQNF LSAATGIAVV IALIRGFARH SARTIGNFWV DFTRGTLYVL LPLSVIVAVF FVSQGAIQNF DAYKEVTTVA ATTYDNPKTD AQGNPIKDAQ GNPVTEKATT QKQTLPMGPI ASQEAIKMLG TNGGGPFNAN SAHPYENPTP LANFVQMLSI FLIPAALCFT FGAMVGDRRQ GWAVLASMTI LFVVLAVFEM WAELHANPML AHLGVDQAVG NMEGKETRFG VVASSLFVTI TTAASCGAVN AMHDSLTALG GFVPMFLIQL GEVVFGGVGS GLYGMLVYAI LAVFIAGLMI GRTPEYLGKK IEVFEMKMTS IAILVTPLLV LVGTAVAVLA SGGRAGIFNP GTHGFSEVLY AFSSAANNNG SAFAGLSANT PFYNVALGIV MWLGRFWIIV PVLAMAGTFA AKKRLPVTVG TLPTHGPLFV VLLIGSVLLV GALTYIPALA LGPIAEHLAR
|
| |