| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3348 |
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| Symbol | |
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| ID | 1222212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3608579 |
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| End bp | 3610825 |
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| Gene Length | 2247 bp |
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| Protein Length | 748 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637239765 |
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| Product | cation-transporting ATPase transmembrane protein |
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| Protein accession | NP_521467 |
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| Protein GI | 17548065 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.701828 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCCG CCAGCCTTGC CGATGCTGCT TCGCTCGACC TGGAAATCGA GGGGATGACC
TGTGCCGCCT GCGCCGGCCG GGTCGAACGC GCGCTGCGCG CGGTGCCCGG GGTGACGCAG
GCCAGTGTCA ATCTCGCCAC CGAACGCGCG CGCGTCCAGC GGGGCGACGC CGTCAGCGGC
GATGCGCTGG TCGCGGCGGT GGTGGCGGCC GGCTATGAAG CGCGCGTCGC GTCGGACGAA
ACGGCGGCCG AGCCGCCCGG CGCCGCGCCG GGTTTCTGGG ACGGCCCCGG CCCCGTGTGG
GTATCGGCGG CATTGTCGCT GCCGCTGGTG GCACCGATGG TGGCCGGCTG GCTGGGGGCC
GGGTGGATGC TGCCGGCGTG GCTGCAATGG CTGCTGGCGA CGCCGGTGCA GTGCGTGATC
GGCGCGCGTT TCTACCGGGC CGGCTGGAAG GCGCTGCGCG CGGGGGCCGG CAACATGGAC
CTGCTGGTGG CGCTGGGCAC CTCCGCGGCC TATGGGCTGT CGCTGTGGCT GTGGTGGCGT
GCCGATGCAG GCGACATGCC GCACCTGTAC TTCGAGAGCG CCGCGGTCGT CATCACGCTG
GTGCGGCTGG GCAAGTGGCT GGAGGCGCGC GCCAAGCGGC AGACCGCCCA GGCCATCCGC
GCGCTGCAGG CGCTGCGGCC CGACACCGCC CGCGTGCGCG GTGCCGACGG CACGCTGCGG
GACGTGCCCA TCGCCCGGGT TCGCGTGGGC GATGCGGTGT CGGTGCGCGC GGGCGAGCGC
ATTGCCGTCG ACGGCACGGT GGTGGAGGGC GCTAGCCATG TCGATCAGTC GATGCTGACC
GGTGAGAGCC TGCCCGTGCC GAAGCGCGCG GGTGACCACG TGACGGCCGG CGCCATCGCC
ACCGACGGCG TGCTGCTGGT GCGCACCACG GCCATCGGCG CGGACACCAT GCTCTCGCGC
ATCATCCGCC TGGTCGAGGA TGCGCAGGCC GCCAAGCCGC CGATCCAGCA GCTGGTGGAC
CGTGTCAGCG CGATCTTCGT GCCGGCCGTG CTGGTGGCCG CGCTGGTGAC GCTGGCCGGC
TGGATGATCG CGGGGGCCGG GTGGGAGAGC GCCATCGTCA ATGCGGTGGC GGTGCTGGTG
ATCGCCTGTC CGTGCGCGCT GGGGCTGGCG ACGCCGTCGG CCGTCATGGC CGGGACCGGG
GCCGGCGCGC GGCGCGGCAT CCTGATCGCC GATGCGCAGG CGCTGGAGCG CGCGCAGCAG
GTGGACTTCG TGGTGTTCGA CAAGACCGGC ACGCTGACGC TCGGCCAGCC GCGCGTGGTG
GCGGTGGAAG CGGCGCCGGG CATCGACGCG GACGCCGTGC TCGACCAGCT CGCCGCGCTG
CAGGCCGAGC ACACGCACCC GCTGGCGCAG GCCACGCGCG ACCATGCATC GGCGCGCGGC
CGTGGTGTCG CGCCGGCACA ATCGCCCGAA GTCCTGGCCG GCCGGGGCGT GCGCGGTGTC
GTGGACGGCG CGGTGCTGGC GCTCGGCAAT GCGCGCTGGA TGGACGAGCT GCAACTCGAT
CGCACCCGCC TGCAGGCACG TGCCGATGCG CTGGAGGCGC AGGGCCAGAC CGTCTCCTGG
CTGGCGCGGG CCGAAGCGGG CGGCCCGGCG CAGCTGCGCG GCCTGATTGC GTTCGGCGAT
GCGCTCAAGC CGGGGGCGCG GGAGGCGGTG GCCGAACTGC GCCGCCGCGG CATCCGCACC
GCGCTGGTGA CGGGCGACAA CGCCGGCGCC GCGCGCGGCG TGGCCGAGGC GCTCGGCATC
GAGACGGTGG CCGCGCAGGT GCTGCCGCAG GACAAGGCCG CGCGGGTGAC GGCATGGCAG
CGCGGCGGCC ACGTGGTGGC GATGGTCGGC GACGGCATCA ACGACGCGCC CGCGCTGGCC
GCGGCCGATG TCGGCATCGC CATGGCCACC GGCACCGATG TCGCCATGCA GGCCGCCGGC
ATCACGCTGA TGCGCGGCGA GCCGCGCCTG GTGCCGGCCG CGCTCGACCT GTCGCAGCGC
ACGGTGGCCA AGATCCGCCA GAACCTGTTC TGGGCGTTCG TCTACAACGT GGTGGGGATT
CCGCTGGCGG CCTTCGGGCT GCTGTCGCCC ACCTTTGCCG GCGCGGCGAT GGCGTTCTCC
AGCGTGAGCG TCGTCACCAA CGCGCTGATG CTGCGGCGCT GGCACCCGCG CTGGGAAACC
GCCACCGCCG GGGGAGACCG CGCATGA
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| Protein sequence | MTAASLADAA SLDLEIEGMT CAACAGRVER ALRAVPGVTQ ASVNLATERA RVQRGDAVSG
DALVAAVVAA GYEARVASDE TAAEPPGAAP GFWDGPGPVW VSAALSLPLV APMVAGWLGA
GWMLPAWLQW LLATPVQCVI GARFYRAGWK ALRAGAGNMD LLVALGTSAA YGLSLWLWWR
ADAGDMPHLY FESAAVVITL VRLGKWLEAR AKRQTAQAIR ALQALRPDTA RVRGADGTLR
DVPIARVRVG DAVSVRAGER IAVDGTVVEG ASHVDQSMLT GESLPVPKRA GDHVTAGAIA
TDGVLLVRTT AIGADTMLSR IIRLVEDAQA AKPPIQQLVD RVSAIFVPAV LVAALVTLAG
WMIAGAGWES AIVNAVAVLV IACPCALGLA TPSAVMAGTG AGARRGILIA DAQALERAQQ
VDFVVFDKTG TLTLGQPRVV AVEAAPGIDA DAVLDQLAAL QAEHTHPLAQ ATRDHASARG
RGVAPAQSPE VLAGRGVRGV VDGAVLALGN ARWMDELQLD RTRLQARADA LEAQGQTVSW
LARAEAGGPA QLRGLIAFGD ALKPGAREAV AELRRRGIRT ALVTGDNAGA ARGVAEALGI
ETVAAQVLPQ DKAARVTAWQ RGGHVVAMVG DGINDAPALA AADVGIAMAT GTDVAMQAAG
ITLMRGEPRL VPAALDLSQR TVAKIRQNLF WAFVYNVVGI PLAAFGLLSP TFAGAAMAFS
SVSVVTNALM LRRWHPRWET ATAGGDRA
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