| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3319 |
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| Symbol | atpA |
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| ID | 1222183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3582345 |
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| End bp | 3583886 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637239736 |
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| Product | F0F1 ATP synthase subunit alpha |
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| Protein accession | NP_521438 |
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| Protein GI | 17548036 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
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| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.162911 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00532822 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCAACTGA ACCCCTCCGA GATCAGCGAC CTGATCAAGA CCCGTATCGA GGGCTTGAAG
GCTGGCGCTG ACGCAAAGAA CACCGGCACG GTCATCTCCG TGACGGACGG CATCTGCCGC
ATTCACGGCC TGTCGGGCGT GATGCAGGGC GAAATGCTGG AATTCCCGGG CAACACGTTC
GGCCTCGCGC TGAACCTCGA GCGCGACTCC GTCGGCGCCG TGGTGCTGGG TGACTACGAG
CACATTTCCG AAGGCAACGA AGTCAAGTGC ACGGGCCGCA TCCTGGAAGT GCCGGTCGGC
CCTGAACTGC TTGGCCGCGT GGTCAACGCG CTGGGCCAGC CGATCGACGG CAAGGGCCCG
ATCAACGCCA AGAAAACGGA CGTGATCGAG AAGGTTGCCC CGGGCGTGAT CGCACGTCAG
TCGGTGAGCC AGCCGGTGCA AACCGGCCTG AAGTCGATCG ACGCGATGGT GCCGATCGGC
CGTGGCCAGC GTGAGCTGAT CATTGGCGAC CGCCAGACCG GCAAGACCGC CGTCGCAGTC
GACGCCATCA TCAACCAGAA GGGCAAGGGC ATCTTCTGCG TGTACGTGGC AATCGGCCAG
AAGGCCTCGA CGATCGCCAA CGTGGTGCGC AAGCTGGAAG AGCACGGCGC GCTGGAATAC
ACGATCGTGG TGGCTGCCGC CGCTTCCGAC TCGGCTGCCA TGCAGTACCT GTCGGCCTAC
GCCGGCTGCA CGATGGGCGA ATACTTCCGC GACCGCGGTG AAGACGCCCT GATCGTTTAT
GACGACCTGA CCAAGCAAGC TTGGGCTTAC CGTCAAGTCT CGCTGCTGCT GCGCCGTCCG
CCGGGCCGTG AAGCCTACCC GGGCGACGTG TTCTACCTGC ACTCGCGCCT GCTGGAGCGT
GCTGCCCGTG TGAACGCCGA GCACATCGAG AAGATCACCA ACGGTGAAGT CAAGGGCAAG
ACCGGTTCGC TGACCGCACT GCCCGTGATC GAAACGCAGG CCGGCGACGT GTCCGCGTTC
GTGCCGACCA ACGTGATCTC GATTACCGAC GGCCAGATCT TCCTGGAAAC CGACCTGTTC
AACGCCGGTA TCCGCCCCGC CATCAACGCC GGTATCTCGG TGTCGCGTGT GGGTGGCGCT
GCGCAGACCA AGGTCGTCAA GAAGCTGTCC GGCGGTATCC GTACCGACCT GGCCCAGTAC
CGTGAGCTGG CTGCGTTCGC GCAGTTCGCT TCCGACCTGG ACGAGGCGAC CCGCAAGCAG
CTCGAGCGCG GCCGCCGCGT GACCGAACTG CTCAAGCAGC CGCAATACCA GCCGCTGCAA
GTGTGGCAGC TGGCCGCGTC GCTGTACGCA GCCAACAATG GCTTCCTCGA CAACGTGGAC
GTGAAGGACA TCCTGGCTTT CGAAAAGGGC CTGCACGACC AGCTGAAGAC GAAGTACGCC
GACCTCATCA ACCGTATCGA AGACACGAAG GATCTGTCGA AGGACGATGA GGCCGCCCTG
CGTGCCGCGA TCGAGGATTT CAAGAAGTCC GCCGCGTTCT AA
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| Protein sequence | MQLNPSEISD LIKTRIEGLK AGADAKNTGT VISVTDGICR IHGLSGVMQG EMLEFPGNTF
GLALNLERDS VGAVVLGDYE HISEGNEVKC TGRILEVPVG PELLGRVVNA LGQPIDGKGP
INAKKTDVIE KVAPGVIARQ SVSQPVQTGL KSIDAMVPIG RGQRELIIGD RQTGKTAVAV
DAIINQKGKG IFCVYVAIGQ KASTIANVVR KLEEHGALEY TIVVAAAASD SAAMQYLSAY
AGCTMGEYFR DRGEDALIVY DDLTKQAWAY RQVSLLLRRP PGREAYPGDV FYLHSRLLER
AARVNAEHIE KITNGEVKGK TGSLTALPVI ETQAGDVSAF VPTNVISITD GQIFLETDLF
NAGIRPAINA GISVSRVGGA AQTKVVKKLS GGIRTDLAQY RELAAFAQFA SDLDEATRKQ
LERGRRVTEL LKQPQYQPLQ VWQLAASLYA ANNGFLDNVD VKDILAFEKG LHDQLKTKYA
DLINRIEDTK DLSKDDEAAL RAAIEDFKKS AAF
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