| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3300 |
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| Symbol | |
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| ID | 1222164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3557507 |
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| End bp | 3558640 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637239717 |
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| Product | putative amino-acid transport signal peptide protein |
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| Protein accession | NP_521419 |
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| Protein GI | 17548017 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTGA AGCAACTGTG GGTGGCGGCG GCACTGTGTG CGCTGGGCAG CGCGGCATCG
GCTCAGGAAG TCATCAAGCT GGGTTTCGCC GCGCCGATGA CCGGCGCCCA GGCCCAGTAC
GGCAAGGACA TGCAGAACGG CGTGACCCTG GCCATCGAAG AGTTCAACGC CACCAAGCCG
AAGATCGCCG GCAAGGATGT GAAATTCCAG CTGGTGTCGG AAGACGACCA GGCCGATCCG
AAGACCGGCA CCACCGTCGC GCAGAAGCTG GTGGACGGTG GCATCAAGGG CATGGTCGGC
CACTTCAACT CGGGCACCAG CATCCCGGCC TCGCGTGTGT ACAACCAGGC CGGCATCGCG
CAGATCGCCA TGGCGACCGC CCCGGAATAC ACGAAGCAGG GCTACAAGAC CACCTTCCGC
ATGATGACCT CCGACACCCA GCAGGGTTCG GTGGTCGGCA CCTTCGCCGT CAAGAAGCTG
GGCTACAAGA ACCTCGCCAT CGTCGATGAC CGCACGGCCT ATGGCCAGGG CCTGGCCGAC
GAGTTCGAGA AGGCCGCCAA GGCCGCCGGC GCCACCATCG TGCGTCGGGA GTACACCAAC
GACAAGGCCA GCGACTTCAA GGCGATCCTC ACGCAGATCA AGAGCAAGAA CCCGGACGCC
GTGTTCTACG GCGGCGCCGA AGGCCAGTCG GCTCCGCTGG TCAAGCAGAT GCGCGAGCTG
GGCATGAAGG CGACGCTGAT GTCGGGCGAA ATGTCCAAGA CCGACGACTT CATCAAGCTG
GCCGGCGCAC CGGCCGCCGA AGGCGTGGTG TGCTCGCTGG CCGGCCTGCC GCTGGAGCAG
ATGCCGGGCG GCGCGGGCTA CAAGCAGCGC TACGAGAAGC GTTTCGGCTC GACGGTGCAG
ACGTACTCGC CGTACGCCTA CGACGGCGCG ATGGCCCTGA TGAAGGCGAT GGTCGCCGCC
GGTTCGTCCG ACCCGAGCAA GTACCTGCCG ATCCTGGCCG CCACCAACGC GCAGGGCGTC
ACCGCCAAGC ACTACGCCTA CGACGACAAG GGCGACCTCA AGGACGGCGG CATCACCGTC
TACAAGGTCA CTGGCGGCAA GTGGGTGCCG CTCGAAAGCG TGGGCGGCAA GTAA
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| Protein sequence | MKLKQLWVAA ALCALGSAAS AQEVIKLGFA APMTGAQAQY GKDMQNGVTL AIEEFNATKP
KIAGKDVKFQ LVSEDDQADP KTGTTVAQKL VDGGIKGMVG HFNSGTSIPA SRVYNQAGIA
QIAMATAPEY TKQGYKTTFR MMTSDTQQGS VVGTFAVKKL GYKNLAIVDD RTAYGQGLAD
EFEKAAKAAG ATIVRREYTN DKASDFKAIL TQIKSKNPDA VFYGGAEGQS APLVKQMREL
GMKATLMSGE MSKTDDFIKL AGAPAAEGVV CSLAGLPLEQ MPGGAGYKQR YEKRFGSTVQ
TYSPYAYDGA MALMKAMVAA GSSDPSKYLP ILAATNAQGV TAKHYAYDDK GDLKDGGITV
YKVTGGKWVP LESVGGK
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