| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3293 |
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| Symbol | gcvT |
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| ID | 1222157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 3545939 |
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| End bp | 3547066 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637239710 |
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| Product | glycine cleavage system aminomethyltransferase T |
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| Protein accession | NP_521412 |
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| Protein GI | 17548010 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.915695 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTCC AACACACGCC GCTCAATGCC ATCCACCGCT CGCTGGGCGC CCGCATGGTC
GACTTTGGCG GCTGGGACAT GCCGGTCAAC TACGGCTCCC AGATCGAGGA ACATCACGCC
GTGCGCCGCG ATGCCGGCAT CTTCGACGTC TCGCACATGT GCGTGGTCGA CCTGACCGGT
GCGCGGGTGC GCGATTTCCT GCGCGGGCTG CTCGCCAACA ACATCGACAA GCTGCAGACC
CCGGGCAAAG CGCTCTACAC CTGCATGCTC AACCCCAAGG GCGGCGTGAT CGATGACCTG
ATCGTCTATT TCTTCCGCGA GGACTGGTTC CGCCTGGTGG TCAACGCCGG CACCGCGCCG
ACCGACATCG AGTGGATCAC CGCGCAGAAC GCCGCCGCCG GCACGGGCGT GGCCATCACG
CCGCGCCGCT CCGACAACAA CGCGGGCGCG GAACCCCTCG GCATCGTGGC CGTGCAGGGC
CCGAACGCGC GCGCCAAGGC CTACGCCGCC TTGCCGGGCA CGCAGGCGGT GGGCGAGGCG
CTCAAGCCGT TCAACGCTGG CTTCGCCACC ATCGACGGCG TGGGCGAGAT CATGGTCGCG
CGCACCGGCT ACACGGGGGA AGACGGCTTC GAGCTGGTGG TGCCCGCCGC GCAGATCGCC
GGCGTCTGGG AGCGCCTGCT GCAGGCCGGC GTGCGCCCCT GCGGCCTGGG CGCGCGCGAC
ACGCTGCGCC TGGAAGCCGG CATGAACCTC TACGGCCAGG ACATGGACGA GCACGTCTCG
CCGCTGGACG CGGGCCTGGC CTGGACGGTC GACCTGCAAA GCGAGCGCGA CTTCAACGGC
AAGGCGGCGC TCGCCGCCAA CGGCCAGCGC GACCAGTTCG TCGGCCTGCT GCTGCGCGAC
AAGGGCGGCG TGCTGCGCGC CCACCAGAAA GTCATCACGG CCGCCGGTGA CGGCGAAATC
ACCAGCGGCA CCTTCAGCCC CAGCCTGTCG CAGTCGATCG CGCTGGCGCG CCTGCCCAAG
GACGTGGCCA TCGGCGCGGA CGTGCAGGTC GAGATCCGCG ACCGCAGGCT GACCGCGACT
GTGGTTAAAC TGCCGTTCGT GCGCAATGGC AAGGCGCTGG TCAGCTGA
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| Protein sequence | MTLQHTPLNA IHRSLGARMV DFGGWDMPVN YGSQIEEHHA VRRDAGIFDV SHMCVVDLTG
ARVRDFLRGL LANNIDKLQT PGKALYTCML NPKGGVIDDL IVYFFREDWF RLVVNAGTAP
TDIEWITAQN AAAGTGVAIT PRRSDNNAGA EPLGIVAVQG PNARAKAYAA LPGTQAVGEA
LKPFNAGFAT IDGVGEIMVA RTGYTGEDGF ELVVPAAQIA GVWERLLQAG VRPCGLGARD
TLRLEAGMNL YGQDMDEHVS PLDAGLAWTV DLQSERDFNG KAALAANGQR DQFVGLLLRD
KGGVLRAHQK VITAAGDGEI TSGTFSPSLS QSIALARLPK DVAIGADVQV EIRDRRLTAT
VVKLPFVRNG KALVS
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