| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3287 |
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| Symbol | solR |
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| ID | 1222151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 3538747 |
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| End bp | 3539457 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637239704 |
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| Product | transcriptional activator SOLR transcription regulator protein |
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| Protein accession | NP_521406 |
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| Protein GI | 17548004 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.840181 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACCAG GCTTCCAGGA CGCGTATCAC GCGTTCCATA CGGCGCAGGA CGAGCGCCAG
CTTTTTCGGC AGATCGCATC CGTCGTCCGG CAGCTCGGCT TTGACTACTG CTGCTACGGC
ATCCGCGTGC CCTTGCCGGT CTCCAAGCCC GCCGTCGCCA TCTTCGATAC GTATCCGGCA
GGCTGGATGG AGCACTACCA GGCCAGCGGC TTCCTGGAGA TCGATCCGAC CGTGCGCACC
GGCGCAAGCA GCAGCGATCT GATCATCTGG CCGGTGTCCA TCCGTGATGA GGCCGCGCGG
CTATGGTCGG ATGCGCGCGA TTTCGGCCTG AACATCGGCG TCGCGCGCTC GAGCTGGACG
GCGCACGGCG CGTTCGGCCT GCTGACGCTG GCGCGCCGCG CCGATCCGCT CACGGCGGCC
GAGCTCGAGC AGCTGTCGGC CACCACCAAC TGGCTGGCCA ACCTGGCGCA CGCGCTGATG
AGCCCGTTCC TGATGCCCAA GCTGGTGCCC GAATCCAGCG CGGCGCTGAC CGCGCGCGAG
CGCGAAGTGC TGTGCTGGAC AGGCGAAGGC AAGACCGCCT ACGAGATCGG ACAGATCCTC
CGCATCTCCG AGCGCACGGT CAATTTCCAC GTCAACAACG TGCTGCTGAA GCTGGCGGCC
ACCAACAAGG TGCAGGCGGT GGTCAAGGCG ATCGCCATCG GACTGATCTA G
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| Protein sequence | MGPGFQDAYH AFHTAQDERQ LFRQIASVVR QLGFDYCCYG IRVPLPVSKP AVAIFDTYPA
GWMEHYQASG FLEIDPTVRT GASSSDLIIW PVSIRDEAAR LWSDARDFGL NIGVARSSWT
AHGAFGLLTL ARRADPLTAA ELEQLSATTN WLANLAHALM SPFLMPKLVP ESSAALTARE
REVLCWTGEG KTAYEIGQIL RISERTVNFH VNNVLLKLAA TNKVQAVVKA IAIGLI
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