Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3284 |
Symbol | hemN |
ID | 1222148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3534913 |
End bp | 3536445 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637239701 |
Product | coproporphyrinogen III oxidase |
Protein accession | NP_521403 |
Protein GI | 17548001 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATGTCA ACGCGACGCC CGGGCCCCGG ACTTACGATG AACCATCCCC ATCGCACCCC ACGATCATGT TCCCCTTCGC CCAGCCGGCC GCCGATGCCG CGGCCGCCAA CGATGCGCCG TTCCGCTGGT CCGCGCCGCA GGTGCGCGCG CTGGCGCAGC GCTTTGACAC ACACGGCCCG CGCTACACGT CGTACCCGAC GGCAGACCGC TTCCACACGG GCTTCGGCAC CGATACCTAC CTGGACGCCC TGCATCGGCG CGCCGCCATC GCGCCCGCGC TGCATGCGCC GCTGTCGCTG TACGTGCACC TGCCGTTCTG CGCCAACCTC TGCTACTACT GCGGCTGCAA CAAGGTCGTG ACCAAGGACC ACACCCGCAG CGCGCGCTAC ATCGGCGCAC TGGCGCGCGA GATGGCGATG GTCGCCCGGC ACATCGGCCC GCTGCGCCAG GCGACCCAGC TGCACTGGGG CGGCGGCACG CCCACCTTCC TGTCGCACGA CGAGATGCGC GATGTGATGG CCGCCACGCG CGAGCACTTC GCCCTGACCT CCGATGCGGA AGTTTCCGTC GAGCTCGATC CGCGCCACGC CAGCGACGCC ACGCTGGAGG TGCTGGCCGG CCTGGGCTTC AATCGCGCGA GCCTCGGCAT CCAGGATTTC GACGCCGACG TGCAGCGCGC CATCCACCGC GTCCAGAGCG TGGAACAGAC GCGCCGCGTG GTCGATTCCG CGCGCCGGCT CGGCTTCGAG TCGATCAGCT TCGATCTGAT CTACGGCCTG CCGCACCAGC ACACCGCAAC CTTCAACGCC ACGCTGGACC GGGTGCTGGA GATGGCGCCC GACCGCCTGT CCGTCTACAG CTACGCGCAC CTGCCGCACC TGTTCAAGCC GCAGCGCCGC ATCGACGCGC TCGCGCTGCC GAGCGCCGAC GAGAAGCTCG ACCTGCTGGC GATGACGGTG GAGCGGCTGG TGGCCGCCGG CTACGTCTAC ATCGGCATGG ACCACTTCGC GCGGCCCGAC GACGCGCTCG CCATCGCGCA GCGCGAAGGG CGGTTGCAGC GCAACTTCCA GGGCTATTCC ACGCACGCCG ATTGCGACCT GCTGGCCTTC GGCATGTCCG CCATCAGCCG CGTCGGCGAT GTCTATGCGC AGAACGAAAA AGAGCTCGAT GCCTATTACG CGCGTATCGA CGCGGGCGAG CTGCCAGTGC TGCGCGGCCT GACCCTGACG CCGGACGACC ATGTGCGCCG TGCCCTGATC GGCGAACTGA TGTGCGGCTT CGAGCTGGAC ATGCGCTTGT TCGGCACCCG CCACGGGCTG AACTTCCGGC AGAGCTTCGC CAGTGAGCTG ACCGCGCTGG CGCCGCTCGA AGATGCTGGC CTGGTGAAGG TGGGCGACGA GCGCATCGTC ATCACGCCGC AGGGGCGGCT GCTGGTGCGG CGCATCGCCA TGGTGTTCGA TGCGCACCTG CACGCGGTCC ACGTGCAGGT GCCGACTGTG GGCGGCGTCC CGCGCTACTC CAAGGTCGTC TGA
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Protein sequence | MHVNATPGPR TYDEPSPSHP TIMFPFAQPA ADAAAANDAP FRWSAPQVRA LAQRFDTHGP RYTSYPTADR FHTGFGTDTY LDALHRRAAI APALHAPLSL YVHLPFCANL CYYCGCNKVV TKDHTRSARY IGALAREMAM VARHIGPLRQ ATQLHWGGGT PTFLSHDEMR DVMAATREHF ALTSDAEVSV ELDPRHASDA TLEVLAGLGF NRASLGIQDF DADVQRAIHR VQSVEQTRRV VDSARRLGFE SISFDLIYGL PHQHTATFNA TLDRVLEMAP DRLSVYSYAH LPHLFKPQRR IDALALPSAD EKLDLLAMTV ERLVAAGYVY IGMDHFARPD DALAIAQREG RLQRNFQGYS THADCDLLAF GMSAISRVGD VYAQNEKELD AYYARIDAGE LPVLRGLTLT PDDHVRRALI GELMCGFELD MRLFGTRHGL NFRQSFASEL TALAPLEDAG LVKVGDERIV ITPQGRLLVR RIAMVFDAHL HAVHVQVPTV GGVPRYSKVV
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