Gene RSc3181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc3181 
Symbol 
ID1222044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3439666 
End bp3440511 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content67% 
IMG OID637239599 
Productputative signal peptide protein 
Protein accessionNP_521302 
Protein GI17547900 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.2743 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGTC CTACCCAATT CTTGAAGATC ACCATCGCTG TTCTGTCGGC TGTAGCCGCC 
ATGGCGGCGT CATCAGCCTA CGCGGATGAC CTGCCGCCGG GCGTCGTGGC CCTCGTCAAC
GGCACTCGCA TCACGCAGGA ACAACTCGAC CGCGCGATCG CCCAGAGCGG CGCGCAGGCC
AATCCGCAGG TCGCGCAGGC GCTCAAGCAG CAGTTGATCG CGCGCGAGCT GTTCCGCCAG
CAGGCCGCCA AGAACCCGGC CTACGACAAG CTGCCGGCAG TCAAGCAGGC CATGCAGGAG
GCGCACGACG CGGTCATCAC CCAGGCCTGG CTGAAGGACA ACATCAAGCC CGCGCCCATC
ACCGAAGAGC AGGTCAAGGC GCGCTACGAC GCCATCGTCG CCAGCCTGGG CGACAAGGAG
TACAAGGCGC GCGTGATCCA GCTCGGCGAC GATGTGACCG CCGCGCAGGT CCTGGCACAG
CTCAAGCAGG GCGGCGACTT CGCCAAGCTG GCACAGCAGT ACAGCACGGC GCCCAACAAG
GTGCGCGGCG GCGACATGGA CTGGGTGAGC TTCAAGGTGC CGGTGGAAGA GGGCAAGACG
CAGAACCTGC CGCTGCCGCT GGCGCGCGAG ATCGCGGCAC TGGGCATCGG CGCGGCGAGC
ACCGCGCCGG TCGAAGTCGG TAGCCAGCGC TACATCGTCA AGGTGGAGGC CGCGCGGCCG
ACGCAGGTGC CGGGGTACGA CACGGTCCGG CCGGCGATCC GGCAGGCGCT GGAAACGGCC
GAGCTGGAGC GTGTGACGGT GCAGGTGGTG GGCGGGTTGT TGAAAGCAGC GAAGATTGTT
CAATGA
 
Protein sequence
MNRPTQFLKI TIAVLSAVAA MAASSAYADD LPPGVVALVN GTRITQEQLD RAIAQSGAQA 
NPQVAQALKQ QLIARELFRQ QAAKNPAYDK LPAVKQAMQE AHDAVITQAW LKDNIKPAPI
TEEQVKARYD AIVASLGDKE YKARVIQLGD DVTAAQVLAQ LKQGGDFAKL AQQYSTAPNK
VRGGDMDWVS FKVPVEEGKT QNLPLPLARE IAALGIGAAS TAPVEVGSQR YIVKVEAARP
TQVPGYDTVR PAIRQALETA ELERVTVQVV GGLLKAAKIV Q