Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3181 |
Symbol | |
ID | 1222044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3439666 |
End bp | 3440511 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637239599 |
Product | putative signal peptide protein |
Protein accession | NP_521302 |
Protein GI | 17547900 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.2743 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCGTC CTACCCAATT CTTGAAGATC ACCATCGCTG TTCTGTCGGC TGTAGCCGCC ATGGCGGCGT CATCAGCCTA CGCGGATGAC CTGCCGCCGG GCGTCGTGGC CCTCGTCAAC GGCACTCGCA TCACGCAGGA ACAACTCGAC CGCGCGATCG CCCAGAGCGG CGCGCAGGCC AATCCGCAGG TCGCGCAGGC GCTCAAGCAG CAGTTGATCG CGCGCGAGCT GTTCCGCCAG CAGGCCGCCA AGAACCCGGC CTACGACAAG CTGCCGGCAG TCAAGCAGGC CATGCAGGAG GCGCACGACG CGGTCATCAC CCAGGCCTGG CTGAAGGACA ACATCAAGCC CGCGCCCATC ACCGAAGAGC AGGTCAAGGC GCGCTACGAC GCCATCGTCG CCAGCCTGGG CGACAAGGAG TACAAGGCGC GCGTGATCCA GCTCGGCGAC GATGTGACCG CCGCGCAGGT CCTGGCACAG CTCAAGCAGG GCGGCGACTT CGCCAAGCTG GCACAGCAGT ACAGCACGGC GCCCAACAAG GTGCGCGGCG GCGACATGGA CTGGGTGAGC TTCAAGGTGC CGGTGGAAGA GGGCAAGACG CAGAACCTGC CGCTGCCGCT GGCGCGCGAG ATCGCGGCAC TGGGCATCGG CGCGGCGAGC ACCGCGCCGG TCGAAGTCGG TAGCCAGCGC TACATCGTCA AGGTGGAGGC CGCGCGGCCG ACGCAGGTGC CGGGGTACGA CACGGTCCGG CCGGCGATCC GGCAGGCGCT GGAAACGGCC GAGCTGGAGC GTGTGACGGT GCAGGTGGTG GGCGGGTTGT TGAAAGCAGC GAAGATTGTT CAATGA
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Protein sequence | MNRPTQFLKI TIAVLSAVAA MAASSAYADD LPPGVVALVN GTRITQEQLD RAIAQSGAQA NPQVAQALKQ QLIARELFRQ QAAKNPAYDK LPAVKQAMQE AHDAVITQAW LKDNIKPAPI TEEQVKARYD AIVASLGDKE YKARVIQLGD DVTAAQVLAQ LKQGGDFAKL AQQYSTAPNK VRGGDMDWVS FKVPVEEGKT QNLPLPLARE IAALGIGAAS TAPVEVGSQR YIVKVEAARP TQVPGYDTVR PAIRQALETA ELERVTVQVV GGLLKAAKIV Q
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