Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3145 |
Symbol | tISRso9 |
ID | 1222009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3395360 |
End bp | 3396682 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637239563 |
Product | ISRSO9-transposase protein |
Protein accession | NP_521266 |
Protein GI | 17547864 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.519223 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTCCGA AGGCACCAGT CAGCGAGGGA GACTTCTTCC GGCAGCCGCT GCGCGAGCAG ATCAACCTGA AGCATCCGCT GGTACGCCTG GCCGATCTGA TCGACTGGGA GCGGTTGAGC GCCGTGATGA GCGAGAGCTT CGTGTCCAAG CGCGGCCGCC CGGCCACCTC GCCACGCTTG ATTGCTGGCT TGCTGTATTT GCAGCACGCG TTTGACCTGT CCGATGAGGA AGTCGTCTGG CAATGGGTTG AGAACCCGTA CTGGCAGGTA TTCACTGGCG AGACGTACCT GCAGACCGAG CCGCCGATCG ACCCGTCGAG CCTGACGCGC TGGCGCAAGC GGTTGGGCGA AGCAGGCGTG GAAGAGCTGC TGGCCGAGAC GATCGGAGTG GCCAAACGAG CCGGGGTGAT CAAGGCCGCC AGCATCAAGC GCGTGATCGT CGACACGACG GTGATGCCGA AGGCAATCGC ACATCCGACC GATTCGCGCT TGCTGGAACG ATGTCGCGAG CATCTGGTGA AGGCGGCAGC CCAGCACGGG CTAAAACTAC GACAGAACTA CAACCGCGAG GCGCCACGGC TGGCGGGCCA GATTGGCCGC TACGCACACG CCAAGCAGTA CAAGCGCATG AAGCGCGCGC TGCGCACCTT GCGCTCGCGG GTGGGTCGGG TGATGCGCGA CGTTGAGCGA CAGCTCGGCG CGGTGGCGGC GCAAAGCCGC ACAGCGCTGG AAGACCTGAT TGGCCGCACC AAGCGGATTC TGTCGCAGAA GCCTAAGGAC AAGCACAAGC TCTACGCGCT GCATGCGCCG GAGGTGGAAT GCATCAGCAA GGGCAAGGCC AGAACGCCGT ACGAGTTCGG CGTGAAGGTG TCGATCACGA CCACACACAA GGAAGGGCTG GTGCTGGGCG CGCGCTCGAT GCCGGGCAAT CCGTACGACG GGCACACGCT GGCCGAGGCG CTGGAGCAGG CAGAGATTCT CAGTGACGCG CGAGCGCAGA TTGCCATCGT TGATCGTGGT TACCGGGGCG TCGACGTTGA AGGCGTGAAG GTCTACCACC CTGGGCTTCG GCGCGGCATC ACGCGTGGCC TGCGCGCGAT GATCCGACGG CGCAGTGCCA TCGAACCCGC CATCGGCCAC ATGAAGGCCG ACGGCAAGCT CGACCGGAAC TGGCTCAAAG GGTCACTGGG CGACGCGATG CATGCGGTGC TCTGCGGCGC TGGCCACAAC CTGCGCATGA TCCTGAGGAA GCTGCGGCTT CTTTACGCCG TCATTCTTGC CGCGCTGCTT GGACGAATCC GCCCTTGTGC ATTGCCGGTA TGA
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Protein sequence | MGPKAPVSEG DFFRQPLREQ INLKHPLVRL ADLIDWERLS AVMSESFVSK RGRPATSPRL IAGLLYLQHA FDLSDEEVVW QWVENPYWQV FTGETYLQTE PPIDPSSLTR WRKRLGEAGV EELLAETIGV AKRAGVIKAA SIKRVIVDTT VMPKAIAHPT DSRLLERCRE HLVKAAAQHG LKLRQNYNRE APRLAGQIGR YAHAKQYKRM KRALRTLRSR VGRVMRDVER QLGAVAAQSR TALEDLIGRT KRILSQKPKD KHKLYALHAP EVECISKGKA RTPYEFGVKV SITTTHKEGL VLGARSMPGN PYDGHTLAEA LEQAEILSDA RAQIAIVDRG YRGVDVEGVK VYHPGLRRGI TRGLRAMIRR RSAIEPAIGH MKADGKLDRN WLKGSLGDAM HAVLCGAGHN LRMILRKLRL LYAVILAALL GRIRPCALPV
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