Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3133 |
Symbol | |
ID | 1221997 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 3379552 |
End bp | 3380100 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637239551 |
Product | putative antibiotic resistance (acetyltransferase) protein |
Protein accession | NP_521254 |
Protein GI | 17547852 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1247] Sortase and related acyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCCC CCGAATCGCA AGACGATGTG CGCCTGATCG ACTGCACCGA GGCCGAGCAT GCGTCCGCCA TCCTCGAGAT CCTGAACGAG GCCATCGTGA ATTCGACGGC CCTGTACGAC TACGTACCGC GCCCCCCGCA GGCCATGGCG ACCTGGTTCG CCGCGAAGCG CGCGGGCGGT TTCCCGGTCG TGGGCGCGGT GGATGCCTCG GGCAAGCTGC TGGGCTTTGG CAGCTGGGGC ACGTTCCGCG CGTTCCCCGC GTACAAGTAC ACGGTGGAGC ACAGCGTCTA CGTGCATCAC GAATGCCGTG GCCGCCGACT GGGCGAGCGC CTGCTGCGTG AACTGATTCG GCGCGCGCAG GAGGCACAGG TGCACGTCCT GGTGGGCTGC ATCGACGCGG CCAATGCCGC GAGCATCGGT TTGCACACGC GGCTGGGATT CGTCCACGCC GGGACCATCC GGGAAGCCGG TTTCAAGTTC GGCCGCTGGC TGGATGCGGC GTTCTACCAG CTCAACCTGG AGATGCCCGC GCAGCCGGTG GACGGCTGA
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Protein sequence | MNAPESQDDV RLIDCTEAEH ASAILEILNE AIVNSTALYD YVPRPPQAMA TWFAAKRAGG FPVVGAVDAS GKLLGFGSWG TFRAFPAYKY TVEHSVYVHH ECRGRRLGER LLRELIRRAQ EAQVHVLVGC IDAANAASIG LHTRLGFVHA GTIREAGFKF GRWLDAAFYQ LNLEMPAQPV DG
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