Gene RSc3133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc3133 
Symbol 
ID1221997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3379552 
End bp3380100 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content67% 
IMG OID637239551 
Productputative antibiotic resistance (acetyltransferase) protein 
Protein accessionNP_521254 
Protein GI17547852 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCC CCGAATCGCA AGACGATGTG CGCCTGATCG ACTGCACCGA GGCCGAGCAT 
GCGTCCGCCA TCCTCGAGAT CCTGAACGAG GCCATCGTGA ATTCGACGGC CCTGTACGAC
TACGTACCGC GCCCCCCGCA GGCCATGGCG ACCTGGTTCG CCGCGAAGCG CGCGGGCGGT
TTCCCGGTCG TGGGCGCGGT GGATGCCTCG GGCAAGCTGC TGGGCTTTGG CAGCTGGGGC
ACGTTCCGCG CGTTCCCCGC GTACAAGTAC ACGGTGGAGC ACAGCGTCTA CGTGCATCAC
GAATGCCGTG GCCGCCGACT GGGCGAGCGC CTGCTGCGTG AACTGATTCG GCGCGCGCAG
GAGGCACAGG TGCACGTCCT GGTGGGCTGC ATCGACGCGG CCAATGCCGC GAGCATCGGT
TTGCACACGC GGCTGGGATT CGTCCACGCC GGGACCATCC GGGAAGCCGG TTTCAAGTTC
GGCCGCTGGC TGGATGCGGC GTTCTACCAG CTCAACCTGG AGATGCCCGC GCAGCCGGTG
GACGGCTGA
 
Protein sequence
MNAPESQDDV RLIDCTEAEH ASAILEILNE AIVNSTALYD YVPRPPQAMA TWFAAKRAGG 
FPVVGAVDAS GKLLGFGSWG TFRAFPAYKY TVEHSVYVHH ECRGRRLGER LLRELIRRAQ
EAQVHVLVGC IDAANAASIG LHTRLGFVHA GTIREAGFKF GRWLDAAFYQ LNLEMPAQPV
DG