Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3111 |
Symbol | gspL |
ID | 1221975 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 3347276 |
End bp | 3348706 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637239529 |
Product | general secretory pathway L transmembrane protein |
Protein accession | NP_521232 |
Protein GI | 17547830 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01709] general secretion pathway protein L |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACGACCT CCCTGTACGT GCGCCTGCCG CACCGGCCCA TCCAATCGCC CGAACGCTGG TCGCAGGGCG CGCTCGCGTC CGTGCCGTTC GCGCTGGTGC GCGAGGAAGG CGCACAGGGG CCGCAGCGGA TCCTGCGCGA AGGTGCCTCG CGCGTCGATG AACTGCCCGC CGCCGACCGG CTCGTGCTGA TGCTGCCCGC CGCCGACGTG CTGCTGGTGC CGGCATCGGT GCCGCCGCTA GCACTGCCCA AGCTGCGCCT GGCCCTGCCC AACCTGGTGG AAGACCGGCT GGTGCAGGAC GCGCAGCAAT GCCATATCGC GCTCGGCCCG CGCCTGGGCA CCGTGCCCGC GCACGGCTGG CGCGCGCCGC GCGAACCGCA AACGCGCGCG CTGATGATCG CCGACCGCGC CTGGATCCGC TTCGTGCTCG ACAGCGTGGC GGGACACAAG CACCGCAGCT GCCATCTGCT GCCTGCGCAG CTGTGCCTGC CGCTTGAAGC GCCGGCGCCG GTCGCCGCCG TCGGCAATGC CGATGCCGCA CAGGCGCACA CCGAGCCCTC GCTCAAGCCG GTCGACGCCG AAGCTGCCGA GGCGACGGCG CAAGCGCCGA GCCCGGCCAC GGCCGCCATC ACGACCATCG CGCTCGACGC AGCGCCGGCG TCCGACGCCG ATGCGCTCCC CGCCGTCGAC ATCACCGTGC GCAACGACCA CGCCGACGGC TACGGCCTGC GCGTGCTGCC CGCGCACGTC GCCGACTGGC TGGCGATCGC CCCGGCGCCG GCGCGGCTGA TGGTGTCGCC CGCCCTGCGC GAACTGGCAC CGACGCTGTC CACCGACCCG GCCGCGGCCC GGTTGGACTG GGCGGTCTGG GCTGCGGGCG CCCGCGCCGC GCTGGCCGGC GGCGATGCCG ACCTGTGCCA GTTCGACTTC GCGCATGGCG GCATCGCCGG CATGGACTGG AGCGCCTGGC GCCTGCCGAT CGCGCTGGCC GTGCTGATCG CGGTCGCCCA GCTGATCGGC ATGAACACGC AATGGCTGAC GCTGCGCGCC GAGCAGAAGC GGCTGGATGC GGCGATGCGC ACCCAGCTGC AGACGGCCTT CCCGAACACG CCGGTGATTC TCGATCCGCC CGCGCAGATG CGGCGCCAGG TCCAGCAACT GCGGCTGGCG GCCGGCAAGG CCGCGCCGGA AGACTTTCTG CCGCTGGCCG ACCGCTTCGC CCAGGCGGCC GCCGGCCTCG CACCCGATGC CCTGCTGGCG CTGGATTACC ACGGCCGCGC GCTGGTGGTG ACGCTCAAGG AAGGCACCGA CACCAACATG CTGCGCACGG CCGCCGCCAC CGTCGGCCTG AAGATGGAGA CCGCCGAAGC ACCGCGCGGC GGCGAAGCGG CCGTGCCCGG CTCGCGCTGG ACGGTCTCCA TCGCGCAATA A
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Protein sequence | MTTSLYVRLP HRPIQSPERW SQGALASVPF ALVREEGAQG PQRILREGAS RVDELPAADR LVLMLPAADV LLVPASVPPL ALPKLRLALP NLVEDRLVQD AQQCHIALGP RLGTVPAHGW RAPREPQTRA LMIADRAWIR FVLDSVAGHK HRSCHLLPAQ LCLPLEAPAP VAAVGNADAA QAHTEPSLKP VDAEAAEATA QAPSPATAAI TTIALDAAPA SDADALPAVD ITVRNDHADG YGLRVLPAHV ADWLAIAPAP ARLMVSPALR ELAPTLSTDP AAARLDWAVW AAGARAALAG GDADLCQFDF AHGGIAGMDW SAWRLPIALA VLIAVAQLIG MNTQWLTLRA EQKRLDAAMR TQLQTAFPNT PVILDPPAQM RRQVQQLRLA AGKAAPEDFL PLADRFAQAA AGLAPDALLA LDYHGRALVV TLKEGTDTNM LRTAAATVGL KMETAEAPRG GEAAVPGSRW TVSIAQ
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