Gene RSc3097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc3097 
Symbol 
ID1221961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3335279 
End bp3335827 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content70% 
IMG OID637239515 
Productputative NAD(P)H oxidoreductase (NAD(P)H dehydrogenase (quinone)) oxidoreductase protein 
Protein accessionNP_521218 
Protein GI17547816 
COG category[R] General function prediction only 
COG ID[COG2249] Putative NADPH-quinone reductase (modulator of drug activity B) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCCGC CGCGCATTCT CGTGATCTAC GCGCATCCCG CGCCGCGCCG CTCGCGCGCC 
AACAAGCCGC TGGCGCGCAT GCTGGCCGGC CTGCCCGGCG TGGCCCTGCA CGATCTCTAC
TGGCACTACC CCGAGTTCGA CATCGACGTG CGCGCCGAGC AACAGGCGCT GGAAGCCGCC
GACCTGGTGG TCCTCCAGTT TCCGGTGCAG TGGTATGCCA CGCCATCGCT GCTCAAGGAG
TGGCTGGATG TCGTGCTGGA GATGGGCTGG GCCTACGGGC CGGGCGGCAC GGCCCTGCGA
GGCAAGCACA TGCTGGTGCT GGCGACCACC GGCGGCCGCG CACACGCCTA CAGTCGGGAC
GGCATCCACG GCCACGCCTT CGACCTGTTC CTGTTGCCCT TGCAGCAGAC CGCCGCCCTG
TGCGGCATGC ACTGGCTGCC GCCGCACGTG CTGCACGACG CCGACGACGC CTCGCCCGAA
GTGCTCGACG CCCATCTCGA GCAGGTACGC GCCAGCCTGC AGCCATGGCT GGCGGCTGTA
CCCGCCTGA
 
Protein sequence
MHPPRILVIY AHPAPRRSRA NKPLARMLAG LPGVALHDLY WHYPEFDIDV RAEQQALEAA 
DLVVLQFPVQ WYATPSLLKE WLDVVLEMGW AYGPGGTALR GKHMLVLATT GGRAHAYSRD
GIHGHAFDLF LLPLQQTAAL CGMHWLPPHV LHDADDASPE VLDAHLEQVR ASLQPWLAAV
PA