Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3093 |
Symbol | |
ID | 1221957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3330055 |
End bp | 3331365 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637239511 |
Product | glutamate carboxypeptidase |
Protein accession | NP_521214 |
Protein GI | 17547812 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAGCCA TGTCGTTCGC GCGGGGAGTG CGCCCGGTCA TGCTGTCCTT GCTGGTGGCG GCCGGCGCGC TGGCCGCGGG CCAGGCGGCC GCCGTGCCGC CGGCCGAGAT CTACAAGCGC GCCCAGCAGG AGAAGCCGGC CCTGATCGAC ACCATGAAGA CGCTGGTGTC GATTGAATCG GGCAGCAGGG ACCTTGAGGG CCTGGACAGG ATCGCAGGCG TGATCGCCGA CCGCCTGCGC CTGCTGGGCG GTGACGTGAA GCTGGTCGAC CCCACCGACC ACGCCTACCG CATGGCCGAC ACCCCCGAGA AGATCGGCAA GATGGTGCTG GCGCGCTTCA AGGGCGAGGG CAAGCGCAAC ATCATGCTGA TCGCGCACAT GGACACGGTG TACCTCAAGG GCATGCTGGC GCAGCAGCCG TTCCGCATCG ACGGCGACCG CGCCTACGGT CTGGGCATTG CCGACGACAA GAACGGCGTG GCGGTGATCC TGCACACGGT GTCCATCCTG CAGTCGGTCG GCTTCAAGCA GTACGGCACG CTGACCGTGC TGATCAACGG CGACGAAGAA ATCAGCTCGC CCGGCGCACG CACCCTGCTG GCCAAGCTGG GCGCCGAGCA GGATGCGGTG TTCTCGTGCG AGGGCACGCG TGCCAGCACC GACAAGCTGT CGCTTGCCAC CAGCGGCATC GGCGCGATCC TGCTGGATGT GAAGGGCAAG GCATCCCATG CGGGCGGCGC ACCGGAGCAG GGCCGCAACG CCCTGTATGA ACTGTCTCAC CAGGTGCTGC AACTGCGCGA CCTGTCCAAC CCGCAGACGG GGCTGAAGGT CAACTGGACA CTGGCCCAGG CCGGCACCAA CCGCAACGTG ATCCCCGCCA CCGCGAGCGC CCAGGCCGAT GTGCGCCTGC TGCGCGCGGC CGACGCCGAC AAGCTGGAAG ACACCATCAA CGAGCGCATC AAGACCCGGC TGATCCCCGA TACGCTGGTC ACGGCCCGGT TCGAACGCCG CCGGCCGCCG CTGGAGGCGA CGCCGGCGTC GCATCGTCTC GGCGAACATG CGCAGAAGAT CTACGGCGAA CTCGGCAAGT CGCTTGAGAT CGACGACAAG GCGGAGGGCG GCGGCACCGA CGCCGCATTC GCCGCCTCCA GGACACAGGC GCCGGTTCTC GAGCGCTTCG GCCTGGCCGG CGCCGGCGCG CACTCGAACG AGGCGGAATA CGTCGACCTG AACTCCATCG TGCCGCGCCT GTATCTGCTG TCGCGCATGG TCATGGACGT CTCGCGCGAC CGCGTGGGCG GCGCCCGGTA A
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Protein sequence | MRAMSFARGV RPVMLSLLVA AGALAAGQAA AVPPAEIYKR AQQEKPALID TMKTLVSIES GSRDLEGLDR IAGVIADRLR LLGGDVKLVD PTDHAYRMAD TPEKIGKMVL ARFKGEGKRN IMLIAHMDTV YLKGMLAQQP FRIDGDRAYG LGIADDKNGV AVILHTVSIL QSVGFKQYGT LTVLINGDEE ISSPGARTLL AKLGAEQDAV FSCEGTRAST DKLSLATSGI GAILLDVKGK ASHAGGAPEQ GRNALYELSH QVLQLRDLSN PQTGLKVNWT LAQAGTNRNV IPATASAQAD VRLLRAADAD KLEDTINERI KTRLIPDTLV TARFERRRPP LEATPASHRL GEHAQKIYGE LGKSLEIDDK AEGGGTDAAF AASRTQAPVL ERFGLAGAGA HSNEAEYVDL NSIVPRLYLL SRMVMDVSRD RVGGAR
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