Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3084 |
Symbol | |
ID | 1221947 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3321077 |
End bp | 3321961 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637239501 |
Product | hypothetical protein |
Protein accession | NP_521205 |
Protein GI | 17547803 |
COG category | [C] Energy production and conversion |
COG ID | [COG3245] Cytochrome c5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.286797 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACG CGCAGCACGA CGAACACGAG CCCCTGATCA AGACCCCCAA GCAACTGATC ATCGCGGTGA TCGCCGCGTT TGCTGTTCCG ATTCTCGTCA TCATCCTGCT GGCCAACTAT GTCGGCCTTG GTGTCAAGGA GGGCGCGGGC AGTTCCGGCA TGTCGGAAGA GGCCGTCAAT GATCGGATCA AGCCGGTTGC GCATCTCGAG CTGAAGGACG TGAACGCGCC GCACGTCTAT AAGACCGGGG AGCAACTCTA CAAGGAAGTC TGCGCGACTT GTCACGCAGC GGGCGTGGCC GGCGCGCCCA AGTTTGGCGA TGCGGCCAGC TGGGCATCGC GCCTGCCGCA AGGCCTGGAC GGCCTGACCA AGGTGGCGCT TGCCGGCAAG GGTGGCATGC CCGCGCGCGG CGGTACCTCG CCGGATGACG TGAGCGACTA CGAGATCGAG CGCGCGATCG TCTACATGGC CAATTCGGGC GGCGGCAAGC TGCAGGAACC GCCCGCGCCG GCCGCCGGTG CTGCGGCGCC GGCATCGGCG GCCGCACCGC AGGCGTCGGA GGCTCCGGCT GCCGCACCTG CTGCGGCCCC CGCAGTCGCA GCCCCGGCCG CGCCCGCCGC TGCGGCAGCG CCGCAAGCCG CCGCCGGCGA CATCGGCAAG AAGGTCTACG ACTCGACCTG CCAGATGTGC CACGCCGCCG GTGTGGCCGG TGCTCCCAAG TTTGGCGACA AGGCTGCCTG GGCGCCGCGC ATCGCCGAGG GCAAGGCCAA GATGTACGAT ATCGCGCTGC ACGGCAAGGG TGCCATGCCG CCGAAGGGCA CCTATGCCGG TTCGGATGAC GACGTGAAGG CCGCCGTCGA TTTCATGGCT GCCGCTGCCA AGTAA
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Protein sequence | MSDAQHDEHE PLIKTPKQLI IAVIAAFAVP ILVIILLANY VGLGVKEGAG SSGMSEEAVN DRIKPVAHLE LKDVNAPHVY KTGEQLYKEV CATCHAAGVA GAPKFGDAAS WASRLPQGLD GLTKVALAGK GGMPARGGTS PDDVSDYEIE RAIVYMANSG GGKLQEPPAP AAGAAAPASA AAPQASEAPA AAPAAAPAVA APAAPAAAAA PQAAAGDIGK KVYDSTCQMC HAAGVAGAPK FGDKAAWAPR IAEGKAKMYD IALHGKGAMP PKGTYAGSDD DVKAAVDFMA AAAK
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