Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3064 |
Symbol | |
ID | 1221927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3302693 |
End bp | 3303424 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637239481 |
Product | response regulator transcription regulator protein |
Protein accession | NP_521185 |
Protein GI | 17547783 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.631075 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.38417 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAGG CGCCGCTCAA GACCAGGGTG CTGCTGATCG AGGACGACGA TCGCCTGGCG CAGCTGGTCA GCGAATATCT GGGCAACTAC GAATTCACGG TCGAGGTGGT CCGGCGCGGC GACATCGCGG TCGCGGCCGT GCGCGAGCAT CGGCCGGCGC TGGTGATCCT CGACCTGATG CTGCCGCACA TGGACGGCAT GGAGGTGTGC CGGCGCATCC GCGCGTTCTC GCGCGTGCCG GTGCTGATCC TGACGGCGCG TGTCGATACC TACGACCAGG TCGCGGGCCT GGAGATCGGC GCCGACGACT ATGTGCTCAA GCCGGTCGAG CCGCGCCTGC TGGTGGCGCG CGCCCGCGCC TTGCTGCGCC GCGTGGCGTC CGCCATGCCG GCCGCCGAGC CCGCCACCCC GCGCGACGAT ACGCTGGTGT TCGGCGAGCT TGCCATCTCG CCGCCCAACC GCACCGTCAC CTGGCGCGGT CAGCCGGTCG AGCTGAAGAC GGCCGAGTTC AACCTGCTGT TGATCCTGGC GCGCGCGGCC GGCACCGTGC TCAGCCGCGA CGACATCCTC AAGCAGTTGC GCGGCATCGA ATTCGACGGG CTGGACCGTA CCGTCGACTC CGGCATCTCG CGCTTGCGCC GCCGCTTCGG CGACGCCTCG CCCGAGCCAC ACAAGATCAA GACGATCTGG GGGCGCGGCT ATTTGTTCAG CCCCTCGGCG TGGGAGGAGT GA
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Protein sequence | MAEAPLKTRV LLIEDDDRLA QLVSEYLGNY EFTVEVVRRG DIAVAAVREH RPALVILDLM LPHMDGMEVC RRIRAFSRVP VLILTARVDT YDQVAGLEIG ADDYVLKPVE PRLLVARARA LLRRVASAMP AAEPATPRDD TLVFGELAIS PPNRTVTWRG QPVELKTAEF NLLLILARAA GTVLSRDDIL KQLRGIEFDG LDRTVDSGIS RLRRRFGDAS PEPHKIKTIW GRGYLFSPSA WEE
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