Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3057 |
Symbol | mdoD |
ID | 1221920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3292927 |
End bp | 3294450 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637239474 |
Product | glucan biosynthesis protein D |
Protein accession | NP_521178 |
Protein GI | 17547776 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3131] Periplasmic glucans biosynthesis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.445662 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.366151 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCGCCGG CGTCCGCCGC GACGGAACCC TTCGACGAAG CCTGGCTGCG CCGGCGCGCG CGCGCCCTTG CGGCGGGGCC CTACCGCAAG CGCAACACGG CATTGCCGCC ACCGCTGGCC GCGCTCGGGT GGGATGCCTA CCAATCGATT GGCGCTCGTG CCGACCATGC CCTGTGGGCC GGGCAGTCCC TGCCGTTTGA CGCAAGATTC TTCCATCTGG GCCTGTTTTT CAAGTCGCCG GTGCGCATGC ACGAGGTGGC GGGCGGCCAG TCGCGCGTCA TCGCCTACGA CCCGGCCATG TTCGACTACG GCAAGAGCGG GCTCGACCAT GCCGCGCTGC CCGCCGACCT CGGCTTCGCC GGCTTCCGTC TGACCACACG CGCCGACCCG ACGCGCGACG TCGCCGCCTT CCTCGGCGCG AGCTATTTCC GCGCGGTGGG CGGGCAGTGG CAGTACGGCA TGTCCGCGCG CGGGCTGGCG ATCGACACCG GCCTGCGGCG GGCCGAGGAG TTTCCCGACT TCACTGAATT CTGGCTGGTG CGCCCGGCGC CCGAAGCCGA CACGCTGCGC GTCTACGCGC TGCTCGATGC CCCCAGTGTG GCCGGCGCCT ACCGCTTCGA CATCCGACCT GGCGACACGC TGGTGATGGA CGTGCAGGCC ACGCTGTTCG TGCGCAAGCC GATCGAGCGG CTCGGCATCG CGCCGCTGAC CAGCATGTTC CTGTACGGCG AGAACGACCG CACCGACCGC GCGGGGGATC GCCAGAGCGC GGCCCGCCGC TGGCGCGCTT CCGACTGGCG CCCGGAGATC CACGATTCCG ACGGGCTGGC CATCTGGCGC GGCTCGGGCG AATGGATCTG GCGGCCGCTG GCCAACCCGC CCGCGCTGCG CAGCCAGCGC TTCGCCGACG ATGGCCCGCG CGGCTTCGGC CTGCTGCAGC GCGACCGCAA CCCGGATCAC TATCAGGACG ACGGGGTGTT CTACGAAAAG CGCCCCAGCG TCTGGGTCGA GCCCGCGCAC GGCTGGGGCG AGGGCGCGGT GGAGCTGGTC GAGCTGTCCG CTGCCGACGA GACCTTCGAC AACATCGTCG CCTTCTGGCG GCCGGCCGTG GCGCCGCAGG CCGGCCAGGA GCTGGCCTTC GGCTACCGGC TGAGTTGGGG CGCCCAGCCC CCGGTGGCGC CGCCGCTGGC GCGCGTGGTG GCCACGCGCA CCGGCATCGG CGGCATCGTC GGGCAGCCGC GCAGGCATTT TTCGTGGCGC TTCGTGATCG ATTTCGCCGG CGGCGAACTG GGCCAGCCCG GCCGCGCCGC CGTCGAGCCC GTCATCCGCG TCTCGCGCGG GCGCGTAGAG ATCGTCTCGG CCCGGCCGCT GGCCAACATC GACGGCGTGC GCGCGATGTT CGACCTGGTG CCGGATGCCG GCAACGCGCC CATCGAACTG CAACTGACGC TGCAATCCGG CGACCGGCCG CTGTCGGAGA CCTGGGCGTA CCAGTGGACA CCGCCGGCGG ATCGGGCCGT GTAG
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Protein sequence | MSPASAATEP FDEAWLRRRA RALAAGPYRK RNTALPPPLA ALGWDAYQSI GARADHALWA GQSLPFDARF FHLGLFFKSP VRMHEVAGGQ SRVIAYDPAM FDYGKSGLDH AALPADLGFA GFRLTTRADP TRDVAAFLGA SYFRAVGGQW QYGMSARGLA IDTGLRRAEE FPDFTEFWLV RPAPEADTLR VYALLDAPSV AGAYRFDIRP GDTLVMDVQA TLFVRKPIER LGIAPLTSMF LYGENDRTDR AGDRQSAARR WRASDWRPEI HDSDGLAIWR GSGEWIWRPL ANPPALRSQR FADDGPRGFG LLQRDRNPDH YQDDGVFYEK RPSVWVEPAH GWGEGAVELV ELSAADETFD NIVAFWRPAV APQAGQELAF GYRLSWGAQP PVAPPLARVV ATRTGIGGIV GQPRRHFSWR FVIDFAGGEL GQPGRAAVEP VIRVSRGRVE IVSARPLANI DGVRAMFDLV PDAGNAPIEL QLTLQSGDRP LSETWAYQWT PPADRAV
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