Gene RSc3055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc3055 
Symbol 
ID1221918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3292237 
End bp3292650 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content62% 
IMG OID637239472 
Producthypothetical protein 
Protein accessionNP_521176 
Protein GI17547774 
COG category[R] General function prediction only 
COG ID[COG5573] Predicted nucleic-acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.187147 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCGA CTGAGGCATT CTTCGACAGC AATGTCGTGC TGTACCTGCT GTCGGCCGAC 
ACCGCCAAGG CCGATGCGGC GGAAACGCTG CTGATGACCG GCGGTGTCGT CACCGTACAG
GTACTGAACG AAACGACGCA CGTGATGCGC CGCAAGCTCG CCATGCCGTG GCACGCGATC
GAAACGGTGC AGGAGGCCGT GCGTGCGCAA TGCCGGGTCG AGCCGCTGAC GCTCGAAACC
CATGATCTCG GACGGCGTAT CGCAGAACGC TACGGATTGT CGGTCTATGA TGCACTGATC
GTCGCGGCGG CATTGCTTGC CGGCTGCAAC GTTCTGTATT CCGAGGATAT GCAGCACGGC
CTGGTGATCG AGCAGCATCT GCGCATCGTC AATCCTTTTC CGGCACGGGC ATGA
 
Protein sequence
MPATEAFFDS NVVLYLLSAD TAKADAAETL LMTGGVVTVQ VLNETTHVMR RKLAMPWHAI 
ETVQEAVRAQ CRVEPLTLET HDLGRRIAER YGLSVYDALI VAAALLAGCN VLYSEDMQHG
LVIEQHLRIV NPFPARA