| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3018 |
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| Symbol | rplD |
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| ID | 1221872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3238558 |
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| End bp | 3239178 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637239426 |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | NP_521139 |
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| Protein GI | 17547737 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000207388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000710925 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGGAACTGA AGCTCCTGCA AGCAGACGGC CAACTCGGCA CCGGCGTTTC CGCCTCGCCC
GAAGTGTTCG GCCGCGATTA CAACGAAGCC CTGGTGCACC AGATCGTTGT CGCTTACCAA
GCCAACGCAC GCAGCGGCAA CCGTAAGCAG AAGGACCGCG AAGAGGTCAA GCACACGACC
AAGAAGCCGT GGCGCCAGAA GGGTACGGGC CGCGCCCGTG CGGGTATGAG CTCCTCGCCG
CTGTGGCGCG GGGGTGGTCG TATTTTCCCG AACAGCCCGG AAGAGAACTT CTCGCAGAAG
GTCAACAAGA AGATGTACCG CGCCGGCATG CGCTCGATTT ATTCGCAGCT CGCCCGCGAA
GGCCGCATCA ATGTCGTCGA CAGCCTGTCC GTCGACGCGC CCAAGACCAA GCTGCTGGCC
GACAAGTTCC GCGCCATGGG CCTGGATTCG GTGCTCGTGA TCACCGATAA CCTGGACGAA
AACCTCTTCC TGGCATCGCG CAACCTGGCG CACGTGCTGG TGGTTGAGCC GCGTCACGCC
GACCCGCTGT CGCTCGTGCA CTACAAGAAG GTGCTCGTGA CCAAGGCAGC CGTCGCGCAG
ATCGAGGAGT TGCTGAAATG A
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| Protein sequence | MELKLLQADG QLGTGVSASP EVFGRDYNEA LVHQIVVAYQ ANARSGNRKQ KDREEVKHTT
KKPWRQKGTG RARAGMSSSP LWRGGGRIFP NSPEENFSQK VNKKMYRAGM RSIYSQLARE
GRINVVDSLS VDAPKTKLLA DKFRAMGLDS VLVITDNLDE NLFLASRNLA HVLVVEPRHA
DPLSLVHYKK VLVTKAAVAQ IEELLK
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