Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2937 |
Symbol | |
ID | 1221791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 3168672 |
End bp | 3169769 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637239345 |
Product | putative periplasmic IRON-binding signal peptide protein |
Protein accession | NP_521058 |
Protein GI | 17547656 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTCGTG GTCACTTTGC GCCTGCGCGC GCCGCAGTCA CTGCTGCCGC CCTCACCTTG GGCACCGCTG CCTTCGCTCA AGTCCCCGCC GGCTACCCGG CCAGCTACGC CGACACCATC GCCGCCGCCA AGAAGGAAGG CAAGGTCGTG GTTTACGCGA CCACCGATAC CAAGGCGGCC GATCCGCTGA TCAAGGATTT CGAGTCGCTG TATCCGGGCG TGAAGGTCGA ATACAACGAC ATGAACAGCA GTGAGCTGTA CAACCGCTTC ATCAGCGAGC AGGCCGCAGG CGGCGCCTCG GCCGACATGA TGTGGAACTC GTCGATGGAT TCGCAGCTCA AGCTGGCGCA GACCTACGCG CTGACGTACC AGTCGCCCGA AGCGGCCAGC CTGCCGAAGT GGGCCGTCTA CAAGGGCCTG GCCTACGGCA CGACGTACGA GCCGGCCGTG TTCCTCTACA ACAAGCGCCT GGTGAAGGAC ACGGAAGTGC CGCAGACGCA TGCCGACTTC GCCAAGCTGG TCGCCAGCCA GCCGGAGCGC TTCAAGAACA AGGTCACGAC CTACGACATC GAAAAGTCCG CCGTGGGCTT CATGATGGCC GCGCAGGACA ACCAGGATTC GCCGCAGTAC CTCGATTTCA TCAAGGCCGT CGGCCCGAAC CTGGTGCTGC AGTCCTCCAC CGGCACGATG ATGGAGCGCG TGGCCTCGGG CGAGAACCTG CTGGCGTACA ACATCCTCGG TTCGTATGCG ATGGCGCGCG CCAAGAAGGA TCCGTCGATC GGTATCGTCT ATCCGAAGGA CTACACGCTG GTGGTCTCGC GCGTGGCGAT GATCGCCAAA AAGGCGCAGC ATCCGAACGC GGCCAAGCTG TGGCTGGACT ACATCCTGTC CAAGCGCGGC CAGGACATCC TCGCCAACAA GTCGGACCTG CACTCGCTGC GTGACGACGT GACGGGCGAA GCCACCGCCG CCGGCCTGAA GCAGATCCTG GGCCAGTCCA TCAAGCCGAT CCCGGTGGAC GAATCCGTGC TGACCTTCCT CGAACCGAAG AAGCGCCTGG ATTTCATCAA GCAATGGCGC ACCGCCGCCG GCCGCTGA
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Protein sequence | MLRGHFAPAR AAVTAAALTL GTAAFAQVPA GYPASYADTI AAAKKEGKVV VYATTDTKAA DPLIKDFESL YPGVKVEYND MNSSELYNRF ISEQAAGGAS ADMMWNSSMD SQLKLAQTYA LTYQSPEAAS LPKWAVYKGL AYGTTYEPAV FLYNKRLVKD TEVPQTHADF AKLVASQPER FKNKVTTYDI EKSAVGFMMA AQDNQDSPQY LDFIKAVGPN LVLQSSTGTM MERVASGENL LAYNILGSYA MARAKKDPSI GIVYPKDYTL VVSRVAMIAK KAQHPNAAKL WLDYILSKRG QDILANKSDL HSLRDDVTGE ATAAGLKQIL GQSIKPIPVD ESVLTFLEPK KRLDFIKQWR TAAGR
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