| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2917 |
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| Symbol | cyoA1 |
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| ID | 1221770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3143792 |
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| End bp | 3144781 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637239324 |
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| Product | transmembrane cytochrome O ubiquinol oxidase subunit II |
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| Protein accession | NP_521038 |
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| Protein GI | 17547636 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 |
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| TIGRFAM ID | [TIGR01433] cytochrome o ubiquinol oxidase subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.215988 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.435396 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAACC AATCCTTTCC ACGTTTGAAG CGGCTTCTGG CCGCAAGCAT TCCCCTGCTG
CTGTCGGGAT GCAACCTGAC GGTCCTGGAC CCGAAGGGGA TGATCGGCGC CGAGGAAAAG
ACGCTGATCA TTGTGGCGAC CGCTCTGATG CTGCTGGTGG TCGTCCCTGT GATCGTGTTG
ACGCTGGCGT TCGCGTGGAA GTACCGCGCG AGCAACACCA AGGCCCGCTA CGAGCCGGAC
TGGTCGCATT CCACCGCGAT CGAAGTGGTG GTGTGGCTGA TCCCGTGCCT GATCATCATC
GCGCTGGGCG TGATCACCTA CCGCTCGACG CACGCGCTCG ATCCGTACAA GCCGATCGAA
TCCGACGTCA AGCCGATCAC CATCGAGGCC GTGTCGCTCG ACTGGAAGTG GCTGTTCATC
TACCCGGAAC TGAAGATCGC GACCGTCAAC CAGATCGCGT TCCCGGCCAA CACGCCCGTC
AACTTCAAGA TCACGTCCGA CTCGGTGATG AACGCCTTCT TCATCCCGCA GCTCGGCAGC
CAGGTGTACG CCATGGCCGG CATGCAGACC AAGCTGCACC TGATCGCGAA CGAAACCGGC
CAGTTTGACG GCATCTCGTC CAACTACAGC GGCGCCGGCT TCACCGGCAT GAAGTTCGTG
GCAACGGCCA TGACCAACGA AGAATTCGAC GCCTGGGTCA AGCAGGTGCG CGCGTCGTCG
CAGAGCCTGA CCAAGGAAGG CTACGCCGAG CTGGCCAAGC CGAGCGAGAA GGTGCCCCCG
GCAATGTACG CCTCGGTGGA CCCGACGCTG TACCACAGCA TCCTGCACAA ATACATGGGC
GACTCGGACA AGGTCCTGAC GCTCGACGAG GCGCTCGAAG GCGCCAACTG CACGACGGCC
ACGGCCGAGG CGGCAACGCG TCCGCTGCCG GTGCAGTCCG CCCTGCCGGC GCCGAAGGCT
GCAACGGCGG CCACGCCCAA GAATTCCTAG
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| Protein sequence | MKNQSFPRLK RLLAASIPLL LSGCNLTVLD PKGMIGAEEK TLIIVATALM LLVVVPVIVL
TLAFAWKYRA SNTKARYEPD WSHSTAIEVV VWLIPCLIII ALGVITYRST HALDPYKPIE
SDVKPITIEA VSLDWKWLFI YPELKIATVN QIAFPANTPV NFKITSDSVM NAFFIPQLGS
QVYAMAGMQT KLHLIANETG QFDGISSNYS GAGFTGMKFV ATAMTNEEFD AWVKQVRASS
QSLTKEGYAE LAKPSEKVPP AMYASVDPTL YHSILHKYMG DSDKVLTLDE ALEGANCTTA
TAEAATRPLP VQSALPAPKA ATAATPKNS
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