Gene RSc2887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2887 
Symbolung 
ID1221740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3114046 
End bp3114846 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content72% 
IMG OID637239294 
Producturacil-DNA glycosylase 
Protein accessionNP_521008 
Protein GI17547606 
COG category[L] Replication, recombination and repair 
COG ID[COG0692] Uracil DNA glycosylase 
TIGRFAM ID[TIGR00628] uracil-DNA glycosylase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.557481 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGCC GCGCTGACCC GGCCCAGGCC ACGCTCTTCG ACGATGACGA ACCCGCCGGT 
GCGCCGACGG CCACGGGTGG CTTCGTTCCG CTGGCCGACC AGTTCGATGC GTTGCCCGCC
GACTGGAAAG CGCTGCTCGG GCCCTGCCTG GCGCGGACCG ACTGGCCGGC CTTGTGCGCC
TTCGTCGACG GCGAACGCGC GGCCGGCAAG CCGATCTTCC CGACCGAGGT CTTCCACGCC
CTGCACCTGA CGCCGGTCGA CGCGGTGCGC GTGATCATCC TCGGCCAGGA TCCGTACCAC
GGCACCGGCA CGGTCGATGG CCGCGAAGTG CCGCAGGCGC ACGGGCTGGC GTTCTCGGTG
CCCGCCGGCG TGCGCGTGCC GCCGAGCCTG CGCAACATCT ACAAGGAAAT CGAGGCGGAA
TACGGCCGCA AGCTGTCCGC CGGCTCCGGC AACCTGGAGG GCTGGGCGCA ACAGGGCGTG
CTGCTGCTCA ACACAGTGCT GACCGTCGAG CAGGGCCAAG CCGCGAGCCA CGCCCGGCGC
GGCTGGGAGC GCATCACGGA TTGCCTGCTG GAGCACCTGG CGCGCGTCGG CCACGCTCGC
GTGTTCATGC TGTGGGGCAG CCACGCCCAG GCCAAGCGCG CCTTGCTGCC GGAAGGGCAT
CTGGTGCTCG AGGCGCCGCA TCCGTCGCCG CTGTCGGCGC ATCGCGGCTT CCTGGGGTGC
GGGCATTTCC GGGCCGCCAA CGACTGGCTG GCGGCGCAGG GGCAGTCGAC GATCGATTGG
CTCCGGCCCC AGGCGGACTG A
 
Protein sequence
MTRRADPAQA TLFDDDEPAG APTATGGFVP LADQFDALPA DWKALLGPCL ARTDWPALCA 
FVDGERAAGK PIFPTEVFHA LHLTPVDAVR VIILGQDPYH GTGTVDGREV PQAHGLAFSV
PAGVRVPPSL RNIYKEIEAE YGRKLSAGSG NLEGWAQQGV LLLNTVLTVE QGQAASHARR
GWERITDCLL EHLARVGHAR VFMLWGSHAQ AKRALLPEGH LVLEAPHPSP LSAHRGFLGC
GHFRAANDWL AAQGQSTIDW LRPQAD