Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2859 |
Symbol | |
ID | 1221707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3078218 |
End bp | 3080314 |
Gene Length | 2097 bp |
Protein Length | 698 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637239261 |
Product | oxidoreductase protein |
Protein accession | NP_520980 |
Protein GI | 17547578 |
COG category | [C] Energy production and conversion |
COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACCC AAGTCATCCG TGCCGCGTGT CCGCACGACT GCCCCGACAC CTGCGCCTTG CTCGTCACCG TGGAGGGCGG CCGCGCCACG CGCGTGCAGG GCGATCCGGA GCATCCGACC ACGCAGGGCG TGCTCTGTAC CAAGGTCAAC CGCTACGCCG AACGCACCTA TCACCCCGAC CGGCTGCTGA CACCGATGAA GCGCATCGGC GCCAAGGGCG AGGGCAGGTT CGCGCCGATC TCGTGGGACG AGGCGCTCGA CACCATTGCC GCCCGCCTGG GCGGGATCGC GGCGCGCAGC CCGCAGGCCA TCCTGCCGTA CAGCTATGCC GGCACCATGG GCCTGGTGCA GGGTGAAAGC ATGGCCGCGC GCTTCTTCCA CAAGCTGGGT GCGTCGCTGC TGGACCGCAC CATCTGCGCC TCGGCCGGCG CGACGGCGCT GCGCTACACG TATGGCGCGA GCCTCGGCAT GGACATCGAG CACGTGCAGG ACGCCCGGCT GATCCTGATC TGGGGCGGCA ATCCGATCGC CTCCAACCTG CATTTCTGGA CGCGCGCCCA GGAGGCCAAG CGGCGCGGCG CCACGCTGGT GGCGATCGAT CCGTATCGCT CGCTGACGGC CGAGAAGTGC CACCGGCATC TGGCCGTGCG CCCCGGCACC GATGCGGCGC TGGCGCTGGC GATGATCCAT GTGCTGATCC GTGACGACCT GCTCGACCAC GGCTACATCG CCGATCACAC GCTGGGCTTC GAGGCGCTGC GCGAGCGCGC GCGGCAGTAC ACGCCCGAGT ACGCCGCCGC GCTGTGCGGC ATCGATGCCG CCGACATCGA ATGGCTGGCC ACGCTGTATG GCACCACCGC CGTGCGCGAG CGCCAGCCCG TGGCCATCCG CCTGAACTAC GGCATGCAGC GCGCCCACGG CGGCGGGCAG GGCGTGCGCG CGGTGGCGTG CCTGCCGTCG CTGGTGGGCG CGTGGCGCGC GCCGGCCGGC GGGCTGCAGC TGTCGACCTC GGGCTTCTTC CCGATCGACA CCGCGGCCTT GCAGCGCCCT GACCTGCTGC CCGGCTGGCC CGCGCAGCCG CGCACCCTCA ACATGAGCAC CATCGGCGAT GCGCTGCTGC ACCCGGGCGA TGCGTCGTTC GGCCCGAAGG TGGAGGCCGT GGTCGTCTAC AACAGCAATC CGGTGGCGGT GGCGCCGGAA TCGCGCAAGG TGGCCGCCGG CTTCGCGCGC GAAGATCTGT TCACGGTCGT GCTGGAGCAC TTCCGGACCG ACACCGCCGA CTACGCCGAC ATCCTGCTGC CCGCCACCAC GCAGCTCGAA CACGTCGACG TGCACAAGGC CTACGGCCAT ACCTACATGC TGGCCAACAA CGCCGCCATC GCGCCGCTGG GCCAGGCGCT GCCGAACACG GAGATCTTCC GCCGCCTCGC GCAGCGCATG GGGTTTGCCG ATCCGTGCTT CGCCGATTCC GACGACGACA TCGCCGCCCA GGCCCTGCGC CGCGGCGACC CGTCCGCCGC CCACATCGAC TGGGCCACGC TCAAGCGCGC GGGCTGGCAG AAGCTGGCGC ACCCAGCCGC GCCGTTCGCG CGCGGCGGCT TCCGCACGCC GTCCGGCCGC TGCGAGTTCT ACTCCGAGCA GATGGCCCGC GACGGCCTCG ACCCGCTGCC CGGCCATGTG CCGCCGCACG AATCGCCCGT CAGCGCGCCG GAACTGGCCA GGCGCTATCC GCTGTCGATG ATCTCGCCGC CGGCGCGCAA CTTCCTCAAC TCGACCTTCG TCAACGTGGA CAGTCTGCGC AACACCGAGG GCGAACCGCA TCTCGACATC CACCCGGCCG ACGCGCACGC GCGCGGCGTG GCCGACGGCA GCATGGTTCG CGTCTTCAAC GACCGCGGCA CCATGCACGC CCGCGCCCGC GTGACCGATC GCGCCCGGCC GGGCGTGGTG GTCGGCCTGT CGATCTGGTG GAAGAAGCTG GCGCCGGACG GTACCAACGC CAACGAACTG ACCAGCCAGC GCCTGACTGA CATGGGCCGG GCCCCCACCT TCTACGACTG CCTGGTGGAG GTCGCACCGG CGGCGCAGGC AGCCTGA
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Protein sequence | MSTQVIRAAC PHDCPDTCAL LVTVEGGRAT RVQGDPEHPT TQGVLCTKVN RYAERTYHPD RLLTPMKRIG AKGEGRFAPI SWDEALDTIA ARLGGIAARS PQAILPYSYA GTMGLVQGES MAARFFHKLG ASLLDRTICA SAGATALRYT YGASLGMDIE HVQDARLILI WGGNPIASNL HFWTRAQEAK RRGATLVAID PYRSLTAEKC HRHLAVRPGT DAALALAMIH VLIRDDLLDH GYIADHTLGF EALRERARQY TPEYAAALCG IDAADIEWLA TLYGTTAVRE RQPVAIRLNY GMQRAHGGGQ GVRAVACLPS LVGAWRAPAG GLQLSTSGFF PIDTAALQRP DLLPGWPAQP RTLNMSTIGD ALLHPGDASF GPKVEAVVVY NSNPVAVAPE SRKVAAGFAR EDLFTVVLEH FRTDTADYAD ILLPATTQLE HVDVHKAYGH TYMLANNAAI APLGQALPNT EIFRRLAQRM GFADPCFADS DDDIAAQALR RGDPSAAHID WATLKRAGWQ KLAHPAAPFA RGGFRTPSGR CEFYSEQMAR DGLDPLPGHV PPHESPVSAP ELARRYPLSM ISPPARNFLN STFVNVDSLR NTEGEPHLDI HPADAHARGV ADGSMVRVFN DRGTMHARAR VTDRARPGVV VGLSIWWKKL APDGTNANEL TSQRLTDMGR APTFYDCLVE VAPAAQAA
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